Gene : HORVU3Hr1G038140 H. vulgare r1
Defline:  (1 of 1) PTHR10277//PTHR10277:SF41 - HOMOCITRATE SYNTHASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1890
Name:  ? HORVU3Hr1G038140 Secondary Identifier:  ? PAC:38402830
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare LEU-DEG2-PWY Hordeum vulgare pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU3Hr1G038140 0.5kb upstream 0.5kb upstream 7785 true chr3H: 219516516-219524300 Hordeum vulgare
HORVU3Hr1G038140 0.5kb upstream 0.5kb upstream 500 false chr3H: 219516516-219517015 Hordeum vulgare
HORVU3Hr1G038140 0.5kb downstream 0.5kb downstream 7785 true chr3H: 219517016-219524800 Hordeum vulgare
HORVU3Hr1G038140 0.5kb downstream 0.5kb downstream 500 false chr3H: 219524301-219524800 Hordeum vulgare
HORVU3Hr1G038140 1.0kb upstream 1.0kb upstream 8285 true chr3H: 219516016-219524300 Hordeum vulgare
HORVU3Hr1G038140 1.0kb upstream 1.0kb upstream 1000 false chr3H: 219516016-219517015 Hordeum vulgare
HORVU3Hr1G038140 1.0kb downstream 1.0kb downstream 8285 true chr3H: 219517016-219525300 Hordeum vulgare
HORVU3Hr1G038140 1.0kb downstream 1.0kb downstream 1000 false chr3H: 219524301-219525300 Hordeum vulgare
HORVU3Hr1G038140 2.0kb upstream 2.0kb upstream 9285 true chr3H: 219515016-219524300 Hordeum vulgare
HORVU3Hr1G038140 2.0kb upstream 2.0kb upstream 2000 false chr3H: 219515016-219517015 Hordeum vulgare
HORVU3Hr1G038140 2.0kb downstream 2.0kb downstream 9285 true chr3H: 219517016-219526300 Hordeum vulgare
HORVU3Hr1G038140 2.0kb downstream 2.0kb downstream 2000 false chr3H: 219524301-219526300 Hordeum vulgare
HORVU3Hr1G038140 5.0kb upstream 5.0kb upstream 12285 true chr3H: 219512016-219524300 Hordeum vulgare
HORVU3Hr1G038140 5.0kb upstream 5.0kb upstream 5000 false chr3H: 219512016-219517015 Hordeum vulgare
HORVU3Hr1G038140 5.0kb downstream 5.0kb downstream 12285 true chr3H: 219517016-219529300 Hordeum vulgare
HORVU3Hr1G038140 5.0kb downstream 5.0kb downstream 5000 false chr3H: 219524301-219529300 Hordeum vulgare
HORVU3Hr1G038140 10.0kb upstream 10.0kb upstream 17285 true chr3H: 219507016-219524300 Hordeum vulgare
HORVU3Hr1G038140 10.0kb upstream 10.0kb upstream 10000 false chr3H: 219507016-219517015 Hordeum vulgare
HORVU3Hr1G038140 10.0kb downstream 10.0kb downstream 17285 true chr3H: 219517016-219534300 Hordeum vulgare
HORVU3Hr1G038140 10.0kb downstream 10.0kb downstream 10000 false chr3H: 219524301-219534300 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575299 5269 Grass View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain