Gene : HORVU3Hr1G015870 H. vulgare r1
Defline:  (1 of 1) PTHR22594:SF5 - ASPARTATE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  773
Name:  ? HORVU3Hr1G015870 Secondary Identifier:  ? PAC:38420220
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare TRNA-CHARGING-PWY Hordeum vulgare pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU3Hr1G015870 0.5kb upstream 0.5kb upstream 12475 true chr3H: 37818859-37831333 Hordeum vulgare
HORVU3Hr1G015870 0.5kb upstream 0.5kb upstream 500 false chr3H: 37818859-37819358 Hordeum vulgare
HORVU3Hr1G015870 0.5kb downstream 0.5kb downstream 12475 true chr3H: 37819359-37831833 Hordeum vulgare
HORVU3Hr1G015870 0.5kb downstream 0.5kb downstream 500 false chr3H: 37831334-37831833 Hordeum vulgare
HORVU3Hr1G015870 1.0kb upstream 1.0kb upstream 12975 true chr3H: 37818359-37831333 Hordeum vulgare
HORVU3Hr1G015870 1.0kb upstream 1.0kb upstream 1000 false chr3H: 37818359-37819358 Hordeum vulgare
HORVU3Hr1G015870 1.0kb downstream 1.0kb downstream 12975 true chr3H: 37819359-37832333 Hordeum vulgare
HORVU3Hr1G015870 1.0kb downstream 1.0kb downstream 1000 false chr3H: 37831334-37832333 Hordeum vulgare
HORVU3Hr1G015870 2.0kb upstream 2.0kb upstream 13975 true chr3H: 37817359-37831333 Hordeum vulgare
HORVU3Hr1G015870 2.0kb upstream 2.0kb upstream 2000 false chr3H: 37817359-37819358 Hordeum vulgare
HORVU3Hr1G015870 2.0kb downstream 2.0kb downstream 13975 true chr3H: 37819359-37833333 Hordeum vulgare
HORVU3Hr1G015870 2.0kb downstream 2.0kb downstream 2000 false chr3H: 37831334-37833333 Hordeum vulgare
HORVU3Hr1G015870 5.0kb upstream 5.0kb upstream 16975 true chr3H: 37814359-37831333 Hordeum vulgare
HORVU3Hr1G015870 5.0kb upstream 5.0kb upstream 5000 false chr3H: 37814359-37819358 Hordeum vulgare
HORVU3Hr1G015870 5.0kb downstream 5.0kb downstream 16975 true chr3H: 37819359-37836333 Hordeum vulgare
HORVU3Hr1G015870 5.0kb downstream 5.0kb downstream 5000 false chr3H: 37831334-37836333 Hordeum vulgare
HORVU3Hr1G015870 10.0kb upstream 10.0kb upstream 21975 true chr3H: 37809359-37831333 Hordeum vulgare
HORVU3Hr1G015870 10.0kb upstream 10.0kb upstream 10000 false chr3H: 37809359-37819358 Hordeum vulgare
HORVU3Hr1G015870 10.0kb downstream 10.0kb downstream 21975 true chr3H: 37819359-37841333 Hordeum vulgare
HORVU3Hr1G015870 10.0kb downstream 10.0kb downstream 10000 false chr3H: 37831334-37841333 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584596 5269 Grass View MSA
122041718 5273 Angiosperm View MSA
121346039 5274 Embryophyte View MSA
123424871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain