Gene : HORVU3Hr1G012420 H. vulgare r1
Defline:  (1 of 2) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease Genomic Order:  575
Name:  ? HORVU3Hr1G012420 Secondary Identifier:  ? PAC:38411436
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare PWY-6689 Hordeum vulgare pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU3Hr1G012420 0.5kb upstream 0.5kb upstream 1926 true chr3H: 26959109-26961034 Hordeum vulgare
HORVU3Hr1G012420 0.5kb upstream 0.5kb upstream 500 false chr3H: 26959109-26959608 Hordeum vulgare
HORVU3Hr1G012420 0.5kb downstream 0.5kb downstream 1926 true chr3H: 26959609-26961534 Hordeum vulgare
HORVU3Hr1G012420 0.5kb downstream 0.5kb downstream 500 false chr3H: 26961035-26961534 Hordeum vulgare
HORVU3Hr1G012420 1.0kb upstream 1.0kb upstream 2426 true chr3H: 26958609-26961034 Hordeum vulgare
HORVU3Hr1G012420 1.0kb upstream 1.0kb upstream 1000 false chr3H: 26958609-26959608 Hordeum vulgare
HORVU3Hr1G012420 1.0kb downstream 1.0kb downstream 2426 true chr3H: 26959609-26962034 Hordeum vulgare
HORVU3Hr1G012420 1.0kb downstream 1.0kb downstream 1000 false chr3H: 26961035-26962034 Hordeum vulgare
HORVU3Hr1G012420 2.0kb upstream 2.0kb upstream 3426 true chr3H: 26957609-26961034 Hordeum vulgare
HORVU3Hr1G012420 2.0kb upstream 2.0kb upstream 2000 false chr3H: 26957609-26959608 Hordeum vulgare
HORVU3Hr1G012420 2.0kb downstream 2.0kb downstream 3426 true chr3H: 26959609-26963034 Hordeum vulgare
HORVU3Hr1G012420 2.0kb downstream 2.0kb downstream 2000 false chr3H: 26961035-26963034 Hordeum vulgare
HORVU3Hr1G012420 5.0kb upstream 5.0kb upstream 6426 true chr3H: 26954609-26961034 Hordeum vulgare
HORVU3Hr1G012420 5.0kb upstream 5.0kb upstream 5000 false chr3H: 26954609-26959608 Hordeum vulgare
HORVU3Hr1G012420 5.0kb downstream 5.0kb downstream 6426 true chr3H: 26959609-26966034 Hordeum vulgare
HORVU3Hr1G012420 5.0kb downstream 5.0kb downstream 5000 false chr3H: 26961035-26966034 Hordeum vulgare
HORVU3Hr1G012420 10.0kb upstream 10.0kb upstream 11426 true chr3H: 26949609-26961034 Hordeum vulgare
HORVU3Hr1G012420 10.0kb upstream 10.0kb upstream 10000 false chr3H: 26949609-26959608 Hordeum vulgare
HORVU3Hr1G012420 10.0kb downstream 10.0kb downstream 11426 true chr3H: 26959609-26971034 Hordeum vulgare
HORVU3Hr1G012420 10.0kb downstream 10.0kb downstream 10000 false chr3H: 26961035-26971034 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041240 5273 Angiosperm View MSA
124584479 5269 Grass View MSA
123429143 5275 Viridiplantae View MSA
121344093 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain