Gene : HORVU6Hr1G009940 H. vulgare r1

Defline:  (1 of 8) KOG4585 - Predicted transposase Genomic Order:  436
Name:  ? HORVU6Hr1G009940 Secondary Identifier:  ? PAC:38494165

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU6Hr1G009940 0.5kb upstream 0.5kb upstream 1838 true chr6H: 17796119-17797956 Hordeum vulgare
HORVU6Hr1G009940 0.5kb upstream 0.5kb upstream 500 false chr6H: 17797457-17797956 Hordeum vulgare
HORVU6Hr1G009940 0.5kb downstream 0.5kb downstream 1838 true chr6H: 17795619-17797456 Hordeum vulgare
HORVU6Hr1G009940 0.5kb downstream 0.5kb downstream 500 false chr6H: 17795619-17796118 Hordeum vulgare
HORVU6Hr1G009940 1.0kb upstream 1.0kb upstream 2338 true chr6H: 17796119-17798456 Hordeum vulgare
HORVU6Hr1G009940 1.0kb upstream 1.0kb upstream 1000 false chr6H: 17797457-17798456 Hordeum vulgare
HORVU6Hr1G009940 1.0kb downstream 1.0kb downstream 2338 true chr6H: 17795119-17797456 Hordeum vulgare
HORVU6Hr1G009940 1.0kb downstream 1.0kb downstream 1000 false chr6H: 17795119-17796118 Hordeum vulgare
HORVU6Hr1G009940 2.0kb upstream 2.0kb upstream 3338 true chr6H: 17796119-17799456 Hordeum vulgare
HORVU6Hr1G009940 2.0kb upstream 2.0kb upstream 2000 false chr6H: 17797457-17799456 Hordeum vulgare
HORVU6Hr1G009940 2.0kb downstream 2.0kb downstream 3338 true chr6H: 17794119-17797456 Hordeum vulgare
HORVU6Hr1G009940 2.0kb downstream 2.0kb downstream 2000 false chr6H: 17794119-17796118 Hordeum vulgare
HORVU6Hr1G009940 5.0kb upstream 5.0kb upstream 6338 true chr6H: 17796119-17802456 Hordeum vulgare
HORVU6Hr1G009940 5.0kb upstream 5.0kb upstream 5000 false chr6H: 17797457-17802456 Hordeum vulgare
HORVU6Hr1G009940 5.0kb downstream 5.0kb downstream 6338 true chr6H: 17791119-17797456 Hordeum vulgare
HORVU6Hr1G009940 5.0kb downstream 5.0kb downstream 5000 false chr6H: 17791119-17796118 Hordeum vulgare
HORVU6Hr1G009940 10.0kb upstream 10.0kb upstream 11338 true chr6H: 17796119-17807456 Hordeum vulgare
HORVU6Hr1G009940 10.0kb upstream 10.0kb upstream 10000 false chr6H: 17797457-17807456 Hordeum vulgare
HORVU6Hr1G009940 10.0kb downstream 10.0kb downstream 11338 true chr6H: 17786119-17797456 Hordeum vulgare
HORVU6Hr1G009940 10.0kb downstream 10.0kb downstream 10000 false chr6H: 17786119-17796118 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121920889 5273 Angiosperm View MSA
124494325 5269 Grass View MSA
121191382 5274 Embryophyte View MSA
123230195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain