Gene : HORVU5Hr1G125130 H. vulgare r1

Defline:  (1 of 4) PTHR11353:SF11 - CHAPERONIN 60 SUBUNIT ALPHA 1, CHLOROPLASTIC Genomic Order:  6114
Name:  ? HORVU5Hr1G125130 Secondary Identifier:  ? PAC:38447476

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU5Hr1G125130 0.5kb upstream 0.5kb upstream 4257 true chr5H: 668105367-668109623 Hordeum vulgare
HORVU5Hr1G125130 0.5kb upstream 0.5kb upstream 500 false chr5H: 668109124-668109623 Hordeum vulgare
HORVU5Hr1G125130 0.5kb downstream 0.5kb downstream 4257 true chr5H: 668104867-668109123 Hordeum vulgare
HORVU5Hr1G125130 0.5kb downstream 0.5kb downstream 500 false chr5H: 668104867-668105366 Hordeum vulgare
HORVU5Hr1G125130 1.0kb upstream 1.0kb upstream 4757 true chr5H: 668105367-668110123 Hordeum vulgare
HORVU5Hr1G125130 1.0kb upstream 1.0kb upstream 1000 false chr5H: 668109124-668110123 Hordeum vulgare
HORVU5Hr1G125130 1.0kb downstream 1.0kb downstream 4757 true chr5H: 668104367-668109123 Hordeum vulgare
HORVU5Hr1G125130 1.0kb downstream 1.0kb downstream 1000 false chr5H: 668104367-668105366 Hordeum vulgare
HORVU5Hr1G125130 2.0kb upstream 2.0kb upstream 5757 true chr5H: 668105367-668111123 Hordeum vulgare
HORVU5Hr1G125130 2.0kb upstream 2.0kb upstream 2000 false chr5H: 668109124-668111123 Hordeum vulgare
HORVU5Hr1G125130 2.0kb downstream 2.0kb downstream 5757 true chr5H: 668103367-668109123 Hordeum vulgare
HORVU5Hr1G125130 2.0kb downstream 2.0kb downstream 2000 false chr5H: 668103367-668105366 Hordeum vulgare
HORVU5Hr1G125130 5.0kb upstream 5.0kb upstream 8757 true chr5H: 668105367-668114123 Hordeum vulgare
HORVU5Hr1G125130 5.0kb upstream 5.0kb upstream 5000 false chr5H: 668109124-668114123 Hordeum vulgare
HORVU5Hr1G125130 5.0kb downstream 5.0kb downstream 8757 true chr5H: 668100367-668109123 Hordeum vulgare
HORVU5Hr1G125130 5.0kb downstream 5.0kb downstream 5000 false chr5H: 668100367-668105366 Hordeum vulgare
HORVU5Hr1G125130 10.0kb upstream 10.0kb upstream 13757 true chr5H: 668105367-668119123 Hordeum vulgare
HORVU5Hr1G125130 10.0kb upstream 10.0kb upstream 10000 false chr5H: 668109124-668119123 Hordeum vulgare
HORVU5Hr1G125130 10.0kb downstream 10.0kb downstream 13757 true chr5H: 668095367-668109123 Hordeum vulgare
HORVU5Hr1G125130 10.0kb downstream 10.0kb downstream 10000 false chr5H: 668095367-668105366 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575686 5269 Grass View MSA
122048196 5273 Angiosperm View MSA
121346372 5274 Embryophyte View MSA
123427883 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain