Gene : HORVU5Hr1G116970 H. vulgare r1

Defline:  (1 of 1) 2.1.1.225 - tRNA:m(4)X modification enzyme Genomic Order:  5693
Name:  ? HORVU5Hr1G116970 Secondary Identifier:  ? PAC:38436034

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare PWY-6829 Hordeum vulgare pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU5Hr1G116970 0.5kb upstream 0.5kb upstream 4695 true chr5H: 649657312-649662006 Hordeum vulgare
HORVU5Hr1G116970 0.5kb upstream 0.5kb upstream 500 false chr5H: 649661507-649662006 Hordeum vulgare
HORVU5Hr1G116970 0.5kb downstream 0.5kb downstream 4695 true chr5H: 649656812-649661506 Hordeum vulgare
HORVU5Hr1G116970 0.5kb downstream 0.5kb downstream 500 false chr5H: 649656812-649657311 Hordeum vulgare
HORVU5Hr1G116970 1.0kb upstream 1.0kb upstream 5195 true chr5H: 649657312-649662506 Hordeum vulgare
HORVU5Hr1G116970 1.0kb upstream 1.0kb upstream 1000 false chr5H: 649661507-649662506 Hordeum vulgare
HORVU5Hr1G116970 1.0kb downstream 1.0kb downstream 5195 true chr5H: 649656312-649661506 Hordeum vulgare
HORVU5Hr1G116970 1.0kb downstream 1.0kb downstream 1000 false chr5H: 649656312-649657311 Hordeum vulgare
HORVU5Hr1G116970 2.0kb upstream 2.0kb upstream 6195 true chr5H: 649657312-649663506 Hordeum vulgare
HORVU5Hr1G116970 2.0kb upstream 2.0kb upstream 2000 false chr5H: 649661507-649663506 Hordeum vulgare
HORVU5Hr1G116970 2.0kb downstream 2.0kb downstream 6195 true chr5H: 649655312-649661506 Hordeum vulgare
HORVU5Hr1G116970 2.0kb downstream 2.0kb downstream 2000 false chr5H: 649655312-649657311 Hordeum vulgare
HORVU5Hr1G116970 5.0kb upstream 5.0kb upstream 9195 true chr5H: 649657312-649666506 Hordeum vulgare
HORVU5Hr1G116970 5.0kb upstream 5.0kb upstream 5000 false chr5H: 649661507-649666506 Hordeum vulgare
HORVU5Hr1G116970 5.0kb downstream 5.0kb downstream 9195 true chr5H: 649652312-649661506 Hordeum vulgare
HORVU5Hr1G116970 5.0kb downstream 5.0kb downstream 5000 false chr5H: 649652312-649657311 Hordeum vulgare
HORVU5Hr1G116970 10.0kb upstream 10.0kb upstream 14195 true chr5H: 649657312-649671506 Hordeum vulgare
HORVU5Hr1G116970 10.0kb upstream 10.0kb upstream 10000 false chr5H: 649661507-649671506 Hordeum vulgare
HORVU5Hr1G116970 10.0kb downstream 10.0kb downstream 14195 true chr5H: 649647312-649661506 Hordeum vulgare
HORVU5Hr1G116970 10.0kb downstream 10.0kb downstream 10000 false chr5H: 649647312-649657311 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581459 5269 Grass View MSA
122046541 5273 Angiosperm View MSA
121347915 5274 Embryophyte View MSA
123424709 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain