Gene : HORVU1Hr1G012300 H. vulgare r1
Defline:  (1 of 1) PTHR11254//PTHR11254:SF327 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED Genomic Order:  613
Name:  ? HORVU1Hr1G012300 Secondary Identifier:  ? PAC:38469805
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare PWY-7511 Hordeum vulgare pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU1Hr1G012300 0.5kb upstream 0.5kb upstream 5572 true chr1H: 30847052-30852623 Hordeum vulgare
HORVU1Hr1G012300 0.5kb upstream 0.5kb upstream 500 false chr1H: 30847052-30847551 Hordeum vulgare
HORVU1Hr1G012300 0.5kb downstream 0.5kb downstream 5572 true chr1H: 30847552-30853123 Hordeum vulgare
HORVU1Hr1G012300 0.5kb downstream 0.5kb downstream 500 false chr1H: 30852624-30853123 Hordeum vulgare
HORVU1Hr1G012300 1.0kb upstream 1.0kb upstream 6072 true chr1H: 30846552-30852623 Hordeum vulgare
HORVU1Hr1G012300 1.0kb upstream 1.0kb upstream 1000 false chr1H: 30846552-30847551 Hordeum vulgare
HORVU1Hr1G012300 1.0kb downstream 1.0kb downstream 6072 true chr1H: 30847552-30853623 Hordeum vulgare
HORVU1Hr1G012300 1.0kb downstream 1.0kb downstream 1000 false chr1H: 30852624-30853623 Hordeum vulgare
HORVU1Hr1G012300 2.0kb upstream 2.0kb upstream 7072 true chr1H: 30845552-30852623 Hordeum vulgare
HORVU1Hr1G012300 2.0kb upstream 2.0kb upstream 2000 false chr1H: 30845552-30847551 Hordeum vulgare
HORVU1Hr1G012300 2.0kb downstream 2.0kb downstream 7072 true chr1H: 30847552-30854623 Hordeum vulgare
HORVU1Hr1G012300 2.0kb downstream 2.0kb downstream 2000 false chr1H: 30852624-30854623 Hordeum vulgare
HORVU1Hr1G012300 5.0kb upstream 5.0kb upstream 10072 true chr1H: 30842552-30852623 Hordeum vulgare
HORVU1Hr1G012300 5.0kb upstream 5.0kb upstream 5000 false chr1H: 30842552-30847551 Hordeum vulgare
HORVU1Hr1G012300 5.0kb downstream 5.0kb downstream 10072 true chr1H: 30847552-30857623 Hordeum vulgare
HORVU1Hr1G012300 5.0kb downstream 5.0kb downstream 5000 false chr1H: 30852624-30857623 Hordeum vulgare
HORVU1Hr1G012300 10.0kb upstream 10.0kb upstream 15072 true chr1H: 30837552-30852623 Hordeum vulgare
HORVU1Hr1G012300 10.0kb upstream 10.0kb upstream 10000 false chr1H: 30837552-30847551 Hordeum vulgare
HORVU1Hr1G012300 10.0kb downstream 10.0kb downstream 15072 true chr1H: 30847552-30862623 Hordeum vulgare
HORVU1Hr1G012300 10.0kb downstream 10.0kb downstream 10000 false chr1H: 30852624-30862623 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574381 5269 Grass View MSA
122044351 5273 Angiosperm View MSA
121310283 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain