Gene : HORVU1Hr1G042510 H. vulgare r1
Defline:  (1 of 3) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  1848
Name:  ? HORVU1Hr1G042510 Secondary Identifier:  ? PAC:38480253
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare PWY1F-FLAVSYN Hordeum vulgare pathologic  
Hvulgare PWY-6787 Hordeum vulgare pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU1Hr1G042510 0.5kb upstream 0.5kb upstream 12782 true chr1H: 308764650-308777431 Hordeum vulgare
HORVU1Hr1G042510 0.5kb upstream 0.5kb upstream 500 false chr1H: 308764650-308765149 Hordeum vulgare
HORVU1Hr1G042510 0.5kb downstream 0.5kb downstream 12782 true chr1H: 308765150-308777931 Hordeum vulgare
HORVU1Hr1G042510 0.5kb downstream 0.5kb downstream 500 false chr1H: 308777432-308777931 Hordeum vulgare
HORVU1Hr1G042510 1.0kb upstream 1.0kb upstream 13282 true chr1H: 308764150-308777431 Hordeum vulgare
HORVU1Hr1G042510 1.0kb upstream 1.0kb upstream 1000 false chr1H: 308764150-308765149 Hordeum vulgare
HORVU1Hr1G042510 1.0kb downstream 1.0kb downstream 13282 true chr1H: 308765150-308778431 Hordeum vulgare
HORVU1Hr1G042510 1.0kb downstream 1.0kb downstream 1000 false chr1H: 308777432-308778431 Hordeum vulgare
HORVU1Hr1G042510 2.0kb upstream 2.0kb upstream 14282 true chr1H: 308763150-308777431 Hordeum vulgare
HORVU1Hr1G042510 2.0kb upstream 2.0kb upstream 2000 false chr1H: 308763150-308765149 Hordeum vulgare
HORVU1Hr1G042510 2.0kb downstream 2.0kb downstream 14282 true chr1H: 308765150-308779431 Hordeum vulgare
HORVU1Hr1G042510 2.0kb downstream 2.0kb downstream 2000 false chr1H: 308777432-308779431 Hordeum vulgare
HORVU1Hr1G042510 5.0kb upstream 5.0kb upstream 17282 true chr1H: 308760150-308777431 Hordeum vulgare
HORVU1Hr1G042510 5.0kb upstream 5.0kb upstream 5000 false chr1H: 308760150-308765149 Hordeum vulgare
HORVU1Hr1G042510 5.0kb downstream 5.0kb downstream 17282 true chr1H: 308765150-308782431 Hordeum vulgare
HORVU1Hr1G042510 5.0kb downstream 5.0kb downstream 5000 false chr1H: 308777432-308782431 Hordeum vulgare
HORVU1Hr1G042510 10.0kb upstream 10.0kb upstream 22282 true chr1H: 308755150-308777431 Hordeum vulgare
HORVU1Hr1G042510 10.0kb upstream 10.0kb upstream 10000 false chr1H: 308755150-308765149 Hordeum vulgare
HORVU1Hr1G042510 10.0kb downstream 10.0kb downstream 22282 true chr1H: 308765150-308787431 Hordeum vulgare
HORVU1Hr1G042510 10.0kb downstream 10.0kb downstream 10000 false chr1H: 308777432-308787431 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568709 5269 Grass View MSA
122045794 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain