Gene : HORVU1Hr1G042540 H. vulgare r1

Defline:  (1 of 12) PTHR35325:SF1 - PHOTOSYSTEM II REACTION CENTER PROTEIN K Genomic Order:  1851
Name:  ? HORVU1Hr1G042540 Secondary Identifier:  ? PAC:38473691

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU1Hr1G042540 0.5kb upstream 0.5kb upstream 689 true chr1H: 308930303-308930991 Hordeum vulgare
HORVU1Hr1G042540 0.5kb upstream 0.5kb upstream 500 false chr1H: 308930492-308930991 Hordeum vulgare
HORVU1Hr1G042540 0.5kb downstream 0.5kb downstream 689 true chr1H: 308929803-308930491 Hordeum vulgare
HORVU1Hr1G042540 0.5kb downstream 0.5kb downstream 500 false chr1H: 308929803-308930302 Hordeum vulgare
HORVU1Hr1G042540 1.0kb upstream 1.0kb upstream 1189 true chr1H: 308930303-308931491 Hordeum vulgare
HORVU1Hr1G042540 1.0kb upstream 1.0kb upstream 1000 false chr1H: 308930492-308931491 Hordeum vulgare
HORVU1Hr1G042540 1.0kb downstream 1.0kb downstream 1189 true chr1H: 308929303-308930491 Hordeum vulgare
HORVU1Hr1G042540 1.0kb downstream 1.0kb downstream 1000 false chr1H: 308929303-308930302 Hordeum vulgare
HORVU1Hr1G042540 2.0kb upstream 2.0kb upstream 2189 true chr1H: 308930303-308932491 Hordeum vulgare
HORVU1Hr1G042540 2.0kb upstream 2.0kb upstream 2000 false chr1H: 308930492-308932491 Hordeum vulgare
HORVU1Hr1G042540 2.0kb downstream 2.0kb downstream 2189 true chr1H: 308928303-308930491 Hordeum vulgare
HORVU1Hr1G042540 2.0kb downstream 2.0kb downstream 2000 false chr1H: 308928303-308930302 Hordeum vulgare
HORVU1Hr1G042540 5.0kb upstream 5.0kb upstream 5189 true chr1H: 308930303-308935491 Hordeum vulgare
HORVU1Hr1G042540 5.0kb upstream 5.0kb upstream 5000 false chr1H: 308930492-308935491 Hordeum vulgare
HORVU1Hr1G042540 5.0kb downstream 5.0kb downstream 5189 true chr1H: 308925303-308930491 Hordeum vulgare
HORVU1Hr1G042540 5.0kb downstream 5.0kb downstream 5000 false chr1H: 308925303-308930302 Hordeum vulgare
HORVU1Hr1G042540 10.0kb upstream 10.0kb upstream 10189 true chr1H: 308930303-308940491 Hordeum vulgare
HORVU1Hr1G042540 10.0kb upstream 10.0kb upstream 10000 false chr1H: 308930492-308940491 Hordeum vulgare
HORVU1Hr1G042540 10.0kb downstream 10.0kb downstream 10189 true chr1H: 308920303-308930491 Hordeum vulgare
HORVU1Hr1G042540 10.0kb downstream 10.0kb downstream 10000 false chr1H: 308920303-308930302 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121967961 5273 Angiosperm View MSA
124541405 5269 Grass View MSA
121238454 5274 Embryophyte View MSA
123277267 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain