Gene : HORVU5Hr1G088130 H. vulgare r1
Defline:  (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  4263
Name:  ? HORVU5Hr1G088130 Secondary Identifier:  ? PAC:38447286
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare CAROTENOID-PWY Hordeum vulgare pathologic  
Hvulgare PWY-6475 Hordeum vulgare pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU5Hr1G088130 0.5kb upstream 0.5kb upstream 2811 true chr5H: 580830035-580832845 Hordeum vulgare
HORVU5Hr1G088130 0.5kb upstream 0.5kb upstream 500 false chr5H: 580830035-580830534 Hordeum vulgare
HORVU5Hr1G088130 0.5kb downstream 0.5kb downstream 2811 true chr5H: 580830535-580833345 Hordeum vulgare
HORVU5Hr1G088130 0.5kb downstream 0.5kb downstream 500 false chr5H: 580832846-580833345 Hordeum vulgare
HORVU5Hr1G088130 1.0kb upstream 1.0kb upstream 3311 true chr5H: 580829535-580832845 Hordeum vulgare
HORVU5Hr1G088130 1.0kb upstream 1.0kb upstream 1000 false chr5H: 580829535-580830534 Hordeum vulgare
HORVU5Hr1G088130 1.0kb downstream 1.0kb downstream 3311 true chr5H: 580830535-580833845 Hordeum vulgare
HORVU5Hr1G088130 1.0kb downstream 1.0kb downstream 1000 false chr5H: 580832846-580833845 Hordeum vulgare
HORVU5Hr1G088130 2.0kb upstream 2.0kb upstream 4311 true chr5H: 580828535-580832845 Hordeum vulgare
HORVU5Hr1G088130 2.0kb upstream 2.0kb upstream 2000 false chr5H: 580828535-580830534 Hordeum vulgare
HORVU5Hr1G088130 2.0kb downstream 2.0kb downstream 4311 true chr5H: 580830535-580834845 Hordeum vulgare
HORVU5Hr1G088130 2.0kb downstream 2.0kb downstream 2000 false chr5H: 580832846-580834845 Hordeum vulgare
HORVU5Hr1G088130 5.0kb upstream 5.0kb upstream 7311 true chr5H: 580825535-580832845 Hordeum vulgare
HORVU5Hr1G088130 5.0kb upstream 5.0kb upstream 5000 false chr5H: 580825535-580830534 Hordeum vulgare
HORVU5Hr1G088130 5.0kb downstream 5.0kb downstream 7311 true chr5H: 580830535-580837845 Hordeum vulgare
HORVU5Hr1G088130 5.0kb downstream 5.0kb downstream 5000 false chr5H: 580832846-580837845 Hordeum vulgare
HORVU5Hr1G088130 10.0kb upstream 10.0kb upstream 12311 true chr5H: 580820535-580832845 Hordeum vulgare
HORVU5Hr1G088130 10.0kb upstream 10.0kb upstream 10000 false chr5H: 580820535-580830534 Hordeum vulgare
HORVU5Hr1G088130 10.0kb downstream 10.0kb downstream 12311 true chr5H: 580830535-580842845 Hordeum vulgare
HORVU5Hr1G088130 10.0kb downstream 10.0kb downstream 10000 false chr5H: 580832846-580842845 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993341 5273 Angiosperm View MSA
124577513 5269 Grass View MSA
121263628 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain