Gene : HORVU1Hr1G080950 H. vulgare r1
Defline:  (1 of 1) PTHR12526:SF304 - STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED Genomic Order:  3863
Name:  ? HORVU1Hr1G080950 Secondary Identifier:  ? PAC:38478611
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare GLYCOGENSYNTH-PWY Hordeum vulgare pathologic  
Hvulgare PWY-622 Hordeum vulgare pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU1Hr1G080950 0.5kb upstream 0.5kb upstream 21813 true chr1H: 526684179-526705991 Hordeum vulgare
HORVU1Hr1G080950 0.5kb upstream 0.5kb upstream 500 false chr1H: 526684179-526684678 Hordeum vulgare
HORVU1Hr1G080950 0.5kb downstream 0.5kb downstream 21813 true chr1H: 526684679-526706491 Hordeum vulgare
HORVU1Hr1G080950 0.5kb downstream 0.5kb downstream 500 false chr1H: 526705992-526706491 Hordeum vulgare
HORVU1Hr1G080950 1.0kb upstream 1.0kb upstream 22313 true chr1H: 526683679-526705991 Hordeum vulgare
HORVU1Hr1G080950 1.0kb upstream 1.0kb upstream 1000 false chr1H: 526683679-526684678 Hordeum vulgare
HORVU1Hr1G080950 1.0kb downstream 1.0kb downstream 22313 true chr1H: 526684679-526706991 Hordeum vulgare
HORVU1Hr1G080950 1.0kb downstream 1.0kb downstream 1000 false chr1H: 526705992-526706991 Hordeum vulgare
HORVU1Hr1G080950 2.0kb upstream 2.0kb upstream 23313 true chr1H: 526682679-526705991 Hordeum vulgare
HORVU1Hr1G080950 2.0kb upstream 2.0kb upstream 2000 false chr1H: 526682679-526684678 Hordeum vulgare
HORVU1Hr1G080950 2.0kb downstream 2.0kb downstream 23313 true chr1H: 526684679-526707991 Hordeum vulgare
HORVU1Hr1G080950 2.0kb downstream 2.0kb downstream 2000 false chr1H: 526705992-526707991 Hordeum vulgare
HORVU1Hr1G080950 5.0kb upstream 5.0kb upstream 26313 true chr1H: 526679679-526705991 Hordeum vulgare
HORVU1Hr1G080950 5.0kb upstream 5.0kb upstream 5000 false chr1H: 526679679-526684678 Hordeum vulgare
HORVU1Hr1G080950 5.0kb downstream 5.0kb downstream 26313 true chr1H: 526684679-526710991 Hordeum vulgare
HORVU1Hr1G080950 5.0kb downstream 5.0kb downstream 5000 false chr1H: 526705992-526710991 Hordeum vulgare
HORVU1Hr1G080950 10.0kb upstream 10.0kb upstream 31313 true chr1H: 526674679-526705991 Hordeum vulgare
HORVU1Hr1G080950 10.0kb upstream 10.0kb upstream 10000 false chr1H: 526674679-526684678 Hordeum vulgare
HORVU1Hr1G080950 10.0kb downstream 10.0kb downstream 31313 true chr1H: 526684679-526715991 Hordeum vulgare
HORVU1Hr1G080950 10.0kb downstream 10.0kb downstream 10000 false chr1H: 526705992-526715991 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578861 5269 Grass View MSA
122042885 5273 Angiosperm View MSA
121344527 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain