Gene : Migut.D01471 M. guttatus v2.0
Defline:  (1 of 3) PTHR31262:SF4 - RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A, CHLOROPLASTIC-RELATED Genomic Order:  1471
Name:  ? Migut.D01471 Secondary Identifier:  ? PAC:28929510
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mguttatus CALVIN-PWY Mimulus guttatus pathologic  
Mguttatus PHOTOALL-PWY Mimulus guttatus pathologic  
Mguttatus PWY-5723 Mimulus guttatus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Migut.D01471 0.5kb upstream 0.5kb upstream 1823 true scaffold_4: 8803190-8805012 Mimulus guttatus
Migut.D01471 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8804513-8805012 Mimulus guttatus
Migut.D01471 0.5kb downstream 0.5kb downstream 1823 true scaffold_4: 8802690-8804512 Mimulus guttatus
Migut.D01471 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8802690-8803189 Mimulus guttatus
Migut.D01471 1.0kb upstream 1.0kb upstream 2323 true scaffold_4: 8803190-8805512 Mimulus guttatus
Migut.D01471 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8804513-8805512 Mimulus guttatus
Migut.D01471 1.0kb downstream 1.0kb downstream 2323 true scaffold_4: 8802190-8804512 Mimulus guttatus
Migut.D01471 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8802190-8803189 Mimulus guttatus
Migut.D01471 2.0kb upstream 2.0kb upstream 3323 true scaffold_4: 8803190-8806512 Mimulus guttatus
Migut.D01471 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8804513-8806512 Mimulus guttatus
Migut.D01471 2.0kb downstream 2.0kb downstream 3323 true scaffold_4: 8801190-8804512 Mimulus guttatus
Migut.D01471 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8801190-8803189 Mimulus guttatus
Migut.D01471 5.0kb upstream 5.0kb upstream 6323 true scaffold_4: 8803190-8809512 Mimulus guttatus
Migut.D01471 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8804513-8809512 Mimulus guttatus
Migut.D01471 5.0kb downstream 5.0kb downstream 6323 true scaffold_4: 8798190-8804512 Mimulus guttatus
Migut.D01471 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8798190-8803189 Mimulus guttatus
Migut.D01471 10.0kb upstream 10.0kb upstream 11323 true scaffold_4: 8803190-8814512 Mimulus guttatus
Migut.D01471 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8804513-8814512 Mimulus guttatus
Migut.D01471 10.0kb downstream 10.0kb downstream 11323 true scaffold_4: 8793190-8804512 Mimulus guttatus
Migut.D01471 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8793190-8803189 Mimulus guttatus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480994 5263 Asterids View MSA
123747186 5271 Pentapetalae View MSA
122796864 5272 Eudicot View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain