Gene : HORVU1Hr1G087180 H. vulgare r1
Defline:  (1 of 1) PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Genomic Order:  4186
Name:  ? HORVU1Hr1G087180 Secondary Identifier:  ? PAC:38460955
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU1Hr1G087180 0.5kb upstream 0.5kb upstream 14675 true chr1H: 538876259-538890933 Hordeum vulgare
HORVU1Hr1G087180 0.5kb upstream 0.5kb upstream 500 false chr1H: 538876259-538876758 Hordeum vulgare
HORVU1Hr1G087180 0.5kb downstream 0.5kb downstream 14675 true chr1H: 538876759-538891433 Hordeum vulgare
HORVU1Hr1G087180 0.5kb downstream 0.5kb downstream 500 false chr1H: 538890934-538891433 Hordeum vulgare
HORVU1Hr1G087180 1.0kb upstream 1.0kb upstream 15175 true chr1H: 538875759-538890933 Hordeum vulgare
HORVU1Hr1G087180 1.0kb upstream 1.0kb upstream 1000 false chr1H: 538875759-538876758 Hordeum vulgare
HORVU1Hr1G087180 1.0kb downstream 1.0kb downstream 15175 true chr1H: 538876759-538891933 Hordeum vulgare
HORVU1Hr1G087180 1.0kb downstream 1.0kb downstream 1000 false chr1H: 538890934-538891933 Hordeum vulgare
HORVU1Hr1G087180 2.0kb upstream 2.0kb upstream 16175 true chr1H: 538874759-538890933 Hordeum vulgare
HORVU1Hr1G087180 2.0kb upstream 2.0kb upstream 2000 false chr1H: 538874759-538876758 Hordeum vulgare
HORVU1Hr1G087180 2.0kb downstream 2.0kb downstream 16175 true chr1H: 538876759-538892933 Hordeum vulgare
HORVU1Hr1G087180 2.0kb downstream 2.0kb downstream 2000 false chr1H: 538890934-538892933 Hordeum vulgare
HORVU1Hr1G087180 5.0kb upstream 5.0kb upstream 19175 true chr1H: 538871759-538890933 Hordeum vulgare
HORVU1Hr1G087180 5.0kb upstream 5.0kb upstream 5000 false chr1H: 538871759-538876758 Hordeum vulgare
HORVU1Hr1G087180 5.0kb downstream 5.0kb downstream 19175 true chr1H: 538876759-538895933 Hordeum vulgare
HORVU1Hr1G087180 5.0kb downstream 5.0kb downstream 5000 false chr1H: 538890934-538895933 Hordeum vulgare
HORVU1Hr1G087180 10.0kb upstream 10.0kb upstream 24175 true chr1H: 538866759-538890933 Hordeum vulgare
HORVU1Hr1G087180 10.0kb upstream 10.0kb upstream 10000 false chr1H: 538866759-538876758 Hordeum vulgare
HORVU1Hr1G087180 10.0kb downstream 10.0kb downstream 24175 true chr1H: 538876759-538900933 Hordeum vulgare
HORVU1Hr1G087180 10.0kb downstream 10.0kb downstream 10000 false chr1H: 538890934-538900933 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585412 5269 Grass View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain