Gene : Migut.E00308 M. guttatus v2.0
Defline:  (1 of 3) PTHR31843:SF2 - ALLENE OXIDE CYCLASE 1, CHLOROPLASTIC-RELATED Genomic Order:  308
Name:  ? Migut.E00308 Secondary Identifier:  ? PAC:28921210
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mguttatus PWY-735 Mimulus guttatus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Migut.E00308 0.5kb upstream 0.5kb upstream 2368 true scaffold_5: 1665087-1667454 Mimulus guttatus
Migut.E00308 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1665087-1665586 Mimulus guttatus
Migut.E00308 0.5kb downstream 0.5kb downstream 2368 true scaffold_5: 1665587-1667954 Mimulus guttatus
Migut.E00308 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1667455-1667954 Mimulus guttatus
Migut.E00308 1.0kb upstream 1.0kb upstream 2868 true scaffold_5: 1664587-1667454 Mimulus guttatus
Migut.E00308 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1664587-1665586 Mimulus guttatus
Migut.E00308 1.0kb downstream 1.0kb downstream 2868 true scaffold_5: 1665587-1668454 Mimulus guttatus
Migut.E00308 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1667455-1668454 Mimulus guttatus
Migut.E00308 2.0kb upstream 2.0kb upstream 3868 true scaffold_5: 1663587-1667454 Mimulus guttatus
Migut.E00308 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1663587-1665586 Mimulus guttatus
Migut.E00308 2.0kb downstream 2.0kb downstream 3868 true scaffold_5: 1665587-1669454 Mimulus guttatus
Migut.E00308 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1667455-1669454 Mimulus guttatus
Migut.E00308 5.0kb upstream 5.0kb upstream 6868 true scaffold_5: 1660587-1667454 Mimulus guttatus
Migut.E00308 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1660587-1665586 Mimulus guttatus
Migut.E00308 5.0kb downstream 5.0kb downstream 6868 true scaffold_5: 1665587-1672454 Mimulus guttatus
Migut.E00308 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1667455-1672454 Mimulus guttatus
Migut.E00308 10.0kb upstream 10.0kb upstream 11868 true scaffold_5: 1655587-1667454 Mimulus guttatus
Migut.E00308 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1655587-1665586 Mimulus guttatus
Migut.E00308 10.0kb downstream 10.0kb downstream 11868 true scaffold_5: 1665587-1677454 Mimulus guttatus
Migut.E00308 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1667455-1677454 Mimulus guttatus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121413824 5263 Asterids View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain