Gene : Migut.H00042 M. guttatus v2.0
Defline:  (1 of 11) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  42
Name:  ? Migut.H00042 Secondary Identifier:  ? PAC:28951151
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Migut.H00042 0.5kb upstream 0.5kb upstream 1913 true scaffold_8: 208480-210392 Mimulus guttatus
Migut.H00042 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 209893-210392 Mimulus guttatus
Migut.H00042 0.5kb downstream 0.5kb downstream 1913 true scaffold_8: 207980-209892 Mimulus guttatus
Migut.H00042 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 207980-208479 Mimulus guttatus
Migut.H00042 1.0kb upstream 1.0kb upstream 2413 true scaffold_8: 208480-210892 Mimulus guttatus
Migut.H00042 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 209893-210892 Mimulus guttatus
Migut.H00042 1.0kb downstream 1.0kb downstream 2413 true scaffold_8: 207480-209892 Mimulus guttatus
Migut.H00042 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 207480-208479 Mimulus guttatus
Migut.H00042 2.0kb upstream 2.0kb upstream 3413 true scaffold_8: 208480-211892 Mimulus guttatus
Migut.H00042 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 209893-211892 Mimulus guttatus
Migut.H00042 2.0kb downstream 2.0kb downstream 3413 true scaffold_8: 206480-209892 Mimulus guttatus
Migut.H00042 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 206480-208479 Mimulus guttatus
Migut.H00042 5.0kb upstream 5.0kb upstream 6413 true scaffold_8: 208480-214892 Mimulus guttatus
Migut.H00042 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 209893-214892 Mimulus guttatus
Migut.H00042 5.0kb downstream 5.0kb downstream 6413 true scaffold_8: 203480-209892 Mimulus guttatus
Migut.H00042 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 203480-208479 Mimulus guttatus
Migut.H00042 10.0kb upstream 10.0kb upstream 11413 true scaffold_8: 208480-219892 Mimulus guttatus
Migut.H00042 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 209893-219892 Mimulus guttatus
Migut.H00042 10.0kb downstream 10.0kb downstream 11413 true scaffold_8: 198480-209892 Mimulus guttatus
Migut.H00042 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 198480-208479 Mimulus guttatus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480329 5263 Asterids View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain