Gene : Migut.H02072 M. guttatus v2.0
Defline:  (1 of 3) PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED Genomic Order:  2072
Name:  ? Migut.H02072 Secondary Identifier:  ? PAC:28952941
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mguttatus PWY-695 Mimulus guttatus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Migut.H02072 0.5kb upstream 0.5kb upstream 2279 true scaffold_8: 19997595-19999873 Mimulus guttatus
Migut.H02072 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 19999374-19999873 Mimulus guttatus
Migut.H02072 0.5kb downstream 0.5kb downstream 2279 true scaffold_8: 19997095-19999373 Mimulus guttatus
Migut.H02072 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 19997095-19997594 Mimulus guttatus
Migut.H02072 1.0kb upstream 1.0kb upstream 2779 true scaffold_8: 19997595-20000373 Mimulus guttatus
Migut.H02072 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 19999374-20000373 Mimulus guttatus
Migut.H02072 1.0kb downstream 1.0kb downstream 2779 true scaffold_8: 19996595-19999373 Mimulus guttatus
Migut.H02072 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 19996595-19997594 Mimulus guttatus
Migut.H02072 2.0kb upstream 2.0kb upstream 3779 true scaffold_8: 19997595-20001373 Mimulus guttatus
Migut.H02072 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 19999374-20001373 Mimulus guttatus
Migut.H02072 2.0kb downstream 2.0kb downstream 3779 true scaffold_8: 19995595-19999373 Mimulus guttatus
Migut.H02072 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 19995595-19997594 Mimulus guttatus
Migut.H02072 5.0kb upstream 5.0kb upstream 6779 true scaffold_8: 19997595-20004373 Mimulus guttatus
Migut.H02072 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 19999374-20004373 Mimulus guttatus
Migut.H02072 5.0kb downstream 5.0kb downstream 6779 true scaffold_8: 19992595-19999373 Mimulus guttatus
Migut.H02072 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 19992595-19997594 Mimulus guttatus
Migut.H02072 10.0kb upstream 10.0kb upstream 11779 true scaffold_8: 19997595-20009373 Mimulus guttatus
Migut.H02072 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 19999374-20009373 Mimulus guttatus
Migut.H02072 10.0kb downstream 10.0kb downstream 11779 true scaffold_8: 19987595-19999373 Mimulus guttatus
Migut.H02072 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 19987595-19997594 Mimulus guttatus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480927 5263 Asterids View MSA
123741505 5271 Pentapetalae View MSA
122796781 5272 Eudicot View MSA
122050852 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain