Gene : Migut.I00421 M. guttatus v2.0

Defline:  (1 of 2) PTHR31576:SF2 - TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B Genomic Order:  421
Name:  ? Migut.I00421 Secondary Identifier:  ? PAC:28930294

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Migut.I00421 0.5kb upstream 0.5kb upstream 2968 true scaffold_9: 8659058-8662025 Mimulus guttatus
Migut.I00421 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 8659058-8659557 Mimulus guttatus
Migut.I00421 0.5kb downstream 0.5kb downstream 2968 true scaffold_9: 8659558-8662525 Mimulus guttatus
Migut.I00421 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 8662026-8662525 Mimulus guttatus
Migut.I00421 1.0kb upstream 1.0kb upstream 3468 true scaffold_9: 8658558-8662025 Mimulus guttatus
Migut.I00421 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 8658558-8659557 Mimulus guttatus
Migut.I00421 1.0kb downstream 1.0kb downstream 3468 true scaffold_9: 8659558-8663025 Mimulus guttatus
Migut.I00421 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 8662026-8663025 Mimulus guttatus
Migut.I00421 2.0kb upstream 2.0kb upstream 4468 true scaffold_9: 8657558-8662025 Mimulus guttatus
Migut.I00421 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 8657558-8659557 Mimulus guttatus
Migut.I00421 2.0kb downstream 2.0kb downstream 4468 true scaffold_9: 8659558-8664025 Mimulus guttatus
Migut.I00421 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 8662026-8664025 Mimulus guttatus
Migut.I00421 5.0kb upstream 5.0kb upstream 7468 true scaffold_9: 8654558-8662025 Mimulus guttatus
Migut.I00421 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 8654558-8659557 Mimulus guttatus
Migut.I00421 5.0kb downstream 5.0kb downstream 7468 true scaffold_9: 8659558-8667025 Mimulus guttatus
Migut.I00421 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 8662026-8667025 Mimulus guttatus
Migut.I00421 10.0kb upstream 10.0kb upstream 12468 true scaffold_9: 8649558-8662025 Mimulus guttatus
Migut.I00421 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 8649558-8659557 Mimulus guttatus
Migut.I00421 10.0kb downstream 10.0kb downstream 12468 true scaffold_9: 8659558-8672025 Mimulus guttatus
Migut.I00421 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 8662026-8672025 Mimulus guttatus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481608 5263 Asterids View MSA
123742102 5271 Pentapetalae View MSA
122796533 5272 Eudicot View MSA
122050673 5273 Angiosperm View MSA
121345414 5274 Embryophyte View MSA
123427215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain