Gene : HORVU4Hr1G081940 H. vulgare r1
Defline:  (1 of 1) K10526 - OPC-8:0 CoA ligase 1 (OPCL1) Genomic Order:  3839
Name:  ? HORVU4Hr1G081940 Secondary Identifier:  ? PAC:38567489
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare PWY-735 Hordeum vulgare pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU4Hr1G081940 0.5kb upstream 0.5kb upstream 5630 true chr4H: 620532205-620537834 Hordeum vulgare
HORVU4Hr1G081940 0.5kb upstream 0.5kb upstream 500 false chr4H: 620537335-620537834 Hordeum vulgare
HORVU4Hr1G081940 0.5kb downstream 0.5kb downstream 5630 true chr4H: 620531705-620537334 Hordeum vulgare
HORVU4Hr1G081940 0.5kb downstream 0.5kb downstream 500 false chr4H: 620531705-620532204 Hordeum vulgare
HORVU4Hr1G081940 1.0kb upstream 1.0kb upstream 6130 true chr4H: 620532205-620538334 Hordeum vulgare
HORVU4Hr1G081940 1.0kb upstream 1.0kb upstream 1000 false chr4H: 620537335-620538334 Hordeum vulgare
HORVU4Hr1G081940 1.0kb downstream 1.0kb downstream 6130 true chr4H: 620531205-620537334 Hordeum vulgare
HORVU4Hr1G081940 1.0kb downstream 1.0kb downstream 1000 false chr4H: 620531205-620532204 Hordeum vulgare
HORVU4Hr1G081940 2.0kb upstream 2.0kb upstream 7130 true chr4H: 620532205-620539334 Hordeum vulgare
HORVU4Hr1G081940 2.0kb upstream 2.0kb upstream 2000 false chr4H: 620537335-620539334 Hordeum vulgare
HORVU4Hr1G081940 2.0kb downstream 2.0kb downstream 7130 true chr4H: 620530205-620537334 Hordeum vulgare
HORVU4Hr1G081940 2.0kb downstream 2.0kb downstream 2000 false chr4H: 620530205-620532204 Hordeum vulgare
HORVU4Hr1G081940 5.0kb upstream 5.0kb upstream 10130 true chr4H: 620532205-620542334 Hordeum vulgare
HORVU4Hr1G081940 5.0kb upstream 5.0kb upstream 5000 false chr4H: 620537335-620542334 Hordeum vulgare
HORVU4Hr1G081940 5.0kb downstream 5.0kb downstream 10130 true chr4H: 620527205-620537334 Hordeum vulgare
HORVU4Hr1G081940 5.0kb downstream 5.0kb downstream 5000 false chr4H: 620527205-620532204 Hordeum vulgare
HORVU4Hr1G081940 10.0kb upstream 10.0kb upstream 15130 true chr4H: 620532205-620547334 Hordeum vulgare
HORVU4Hr1G081940 10.0kb upstream 10.0kb upstream 10000 false chr4H: 620537335-620547334 Hordeum vulgare
HORVU4Hr1G081940 10.0kb downstream 10.0kb downstream 15130 true chr4H: 620522205-620537334 Hordeum vulgare
HORVU4Hr1G081940 10.0kb downstream 10.0kb downstream 10000 false chr4H: 620522205-620532204 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576093 5269 Grass View MSA
122043430 5273 Angiosperm View MSA
121350022 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain