Gene : Migut.K00397 M. guttatus v2.0
Defline:  (1 of 2) PF00575//PF03876 - S1 RNA binding domain (S1) // SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 (SHS2_Rpb7-N) Genomic Order:  397
Name:  ? Migut.K00397 Secondary Identifier:  ? PAC:28936588
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Migut.K00397 0.5kb upstream 0.5kb upstream 3411 true scaffold_11: 1904751-1908161 Mimulus guttatus
Migut.K00397 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 1904751-1905250 Mimulus guttatus
Migut.K00397 0.5kb downstream 0.5kb downstream 3411 true scaffold_11: 1905251-1908661 Mimulus guttatus
Migut.K00397 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 1908162-1908661 Mimulus guttatus
Migut.K00397 1.0kb upstream 1.0kb upstream 3911 true scaffold_11: 1904251-1908161 Mimulus guttatus
Migut.K00397 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 1904251-1905250 Mimulus guttatus
Migut.K00397 1.0kb downstream 1.0kb downstream 3911 true scaffold_11: 1905251-1909161 Mimulus guttatus
Migut.K00397 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 1908162-1909161 Mimulus guttatus
Migut.K00397 2.0kb upstream 2.0kb upstream 4911 true scaffold_11: 1903251-1908161 Mimulus guttatus
Migut.K00397 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 1903251-1905250 Mimulus guttatus
Migut.K00397 2.0kb downstream 2.0kb downstream 4911 true scaffold_11: 1905251-1910161 Mimulus guttatus
Migut.K00397 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 1908162-1910161 Mimulus guttatus
Migut.K00397 5.0kb upstream 5.0kb upstream 7911 true scaffold_11: 1900251-1908161 Mimulus guttatus
Migut.K00397 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 1900251-1905250 Mimulus guttatus
Migut.K00397 5.0kb downstream 5.0kb downstream 7911 true scaffold_11: 1905251-1913161 Mimulus guttatus
Migut.K00397 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 1908162-1913161 Mimulus guttatus
Migut.K00397 10.0kb upstream 10.0kb upstream 12911 true scaffold_11: 1895251-1908161 Mimulus guttatus
Migut.K00397 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 1895251-1905250 Mimulus guttatus
Migut.K00397 10.0kb downstream 10.0kb downstream 12911 true scaffold_11: 1905251-1918161 Mimulus guttatus
Migut.K00397 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 1908162-1918161 Mimulus guttatus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475513 5263 Asterids View MSA
123736511 5271 Pentapetalae View MSA
122789999 5272 Eudicot View MSA
122045109 5273 Angiosperm View MSA
121343808 5274 Embryophyte View MSA
123424516 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain