Gene : Migut.K01429 M. guttatus v2.0
Defline:  (1 of 11) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1429
Name:  ? Migut.K01429 Secondary Identifier:  ? PAC:28937895
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Migut.K01429 0.5kb upstream 0.5kb upstream 1635 true scaffold_11: 23914693-23916327 Mimulus guttatus
Migut.K01429 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 23915828-23916327 Mimulus guttatus
Migut.K01429 0.5kb downstream 0.5kb downstream 1635 true scaffold_11: 23914193-23915827 Mimulus guttatus
Migut.K01429 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 23914193-23914692 Mimulus guttatus
Migut.K01429 1.0kb upstream 1.0kb upstream 2135 true scaffold_11: 23914693-23916827 Mimulus guttatus
Migut.K01429 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 23915828-23916827 Mimulus guttatus
Migut.K01429 1.0kb downstream 1.0kb downstream 2135 true scaffold_11: 23913693-23915827 Mimulus guttatus
Migut.K01429 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 23913693-23914692 Mimulus guttatus
Migut.K01429 2.0kb upstream 2.0kb upstream 3135 true scaffold_11: 23914693-23917827 Mimulus guttatus
Migut.K01429 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 23915828-23917827 Mimulus guttatus
Migut.K01429 2.0kb downstream 2.0kb downstream 3135 true scaffold_11: 23912693-23915827 Mimulus guttatus
Migut.K01429 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 23912693-23914692 Mimulus guttatus
Migut.K01429 5.0kb upstream 5.0kb upstream 6135 true scaffold_11: 23914693-23920827 Mimulus guttatus
Migut.K01429 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 23915828-23920827 Mimulus guttatus
Migut.K01429 5.0kb downstream 5.0kb downstream 6135 true scaffold_11: 23909693-23915827 Mimulus guttatus
Migut.K01429 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 23909693-23914692 Mimulus guttatus
Migut.K01429 10.0kb upstream 10.0kb upstream 11135 true scaffold_11: 23914693-23925827 Mimulus guttatus
Migut.K01429 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 23915828-23925827 Mimulus guttatus
Migut.K01429 10.0kb downstream 10.0kb downstream 11135 true scaffold_11: 23904693-23915827 Mimulus guttatus
Migut.K01429 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 23904693-23914692 Mimulus guttatus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480329 5263 Asterids View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain