Gene : Migut.M01646 M. guttatus v2.0
Defline:  (1 of 11) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1646
Name:  ? Migut.M01646 Secondary Identifier:  ? PAC:28949237
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Migut.M01646 0.5kb upstream 0.5kb upstream 2610   true scaffold_13: 19442065-19444674 Mimulus guttatus
Migut.M01646 0.5kb upstream 0.5kb upstream 500   false scaffold_13: 19444175-19444674 Mimulus guttatus
Migut.M01646 0.5kb downstream 0.5kb downstream 2610   true scaffold_13: 19441565-19444174 Mimulus guttatus
Migut.M01646 0.5kb downstream 0.5kb downstream 500   false scaffold_13: 19441565-19442064 Mimulus guttatus
Migut.M01646 1.0kb upstream 1.0kb upstream 3110   true scaffold_13: 19442065-19445174 Mimulus guttatus
Migut.M01646 1.0kb upstream 1.0kb upstream 1000   false scaffold_13: 19444175-19445174 Mimulus guttatus
Migut.M01646 1.0kb downstream 1.0kb downstream 3110   true scaffold_13: 19441065-19444174 Mimulus guttatus
Migut.M01646 1.0kb downstream 1.0kb downstream 1000   false scaffold_13: 19441065-19442064 Mimulus guttatus
Migut.M01646 2.0kb upstream 2.0kb upstream 4110   true scaffold_13: 19442065-19446174 Mimulus guttatus
Migut.M01646 2.0kb upstream 2.0kb upstream 2000   false scaffold_13: 19444175-19446174 Mimulus guttatus
Migut.M01646 2.0kb downstream 2.0kb downstream 4110   true scaffold_13: 19440065-19444174 Mimulus guttatus
Migut.M01646 2.0kb downstream 2.0kb downstream 2000   false scaffold_13: 19440065-19442064 Mimulus guttatus
Migut.M01646 5.0kb upstream 5.0kb upstream 7110   true scaffold_13: 19442065-19449174 Mimulus guttatus
Migut.M01646 5.0kb upstream 5.0kb upstream 5000   false scaffold_13: 19444175-19449174 Mimulus guttatus
Migut.M01646 5.0kb downstream 5.0kb downstream 7110   true scaffold_13: 19437065-19444174 Mimulus guttatus
Migut.M01646 5.0kb downstream 5.0kb downstream 5000   false scaffold_13: 19437065-19442064 Mimulus guttatus
Migut.M01646 10.0kb upstream 10.0kb upstream 12110   true scaffold_13: 19442065-19454174 Mimulus guttatus
Migut.M01646 10.0kb upstream 10.0kb upstream 10000   false scaffold_13: 19444175-19454174 Mimulus guttatus
Migut.M01646 10.0kb downstream 10.0kb downstream 12110   true scaffold_13: 19432065-19444174 Mimulus guttatus
Migut.M01646 10.0kb downstream 10.0kb downstream 10000   false scaffold_13: 19432065-19442064 Mimulus guttatus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479350 5263 Asterids View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain