Gene : Lsat_1_v5_gn_0_10580 L. sativa V8
Defline:  (1 of 4) PTHR13832//PTHR13832:SF286 - PROTEIN PHOSPHATASE 2C // PROTEIN PHOSPHATASE 2C 33-RELATED Genomic Order:  130
Name:  ? Lsat_1_v5_gn_0_10580 Secondary Identifier:  ? PAC:38935791
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_10580 0.5kb upstream 0.5kb upstream 3763   true Lsat_1_v8_lg_0: 13316131-13319893 Lactuca sativa
Lsat_1_v5_gn_0_10580 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 13319394-13319893 Lactuca sativa
Lsat_1_v5_gn_0_10580 0.5kb downstream 0.5kb downstream 3763   true Lsat_1_v8_lg_0: 13315631-13319393 Lactuca sativa
Lsat_1_v5_gn_0_10580 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 13315631-13316130 Lactuca sativa
Lsat_1_v5_gn_0_10580 1.0kb upstream 1.0kb upstream 4263   true Lsat_1_v8_lg_0: 13316131-13320393 Lactuca sativa
Lsat_1_v5_gn_0_10580 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 13319394-13320393 Lactuca sativa
Lsat_1_v5_gn_0_10580 1.0kb downstream 1.0kb downstream 4263   true Lsat_1_v8_lg_0: 13315131-13319393 Lactuca sativa
Lsat_1_v5_gn_0_10580 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 13315131-13316130 Lactuca sativa
Lsat_1_v5_gn_0_10580 2.0kb upstream 2.0kb upstream 5263   true Lsat_1_v8_lg_0: 13316131-13321393 Lactuca sativa
Lsat_1_v5_gn_0_10580 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 13319394-13321393 Lactuca sativa
Lsat_1_v5_gn_0_10580 2.0kb downstream 2.0kb downstream 5263   true Lsat_1_v8_lg_0: 13314131-13319393 Lactuca sativa
Lsat_1_v5_gn_0_10580 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 13314131-13316130 Lactuca sativa
Lsat_1_v5_gn_0_10580 5.0kb upstream 5.0kb upstream 8263   true Lsat_1_v8_lg_0: 13316131-13324393 Lactuca sativa
Lsat_1_v5_gn_0_10580 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 13319394-13324393 Lactuca sativa
Lsat_1_v5_gn_0_10580 5.0kb downstream 5.0kb downstream 8263   true Lsat_1_v8_lg_0: 13311131-13319393 Lactuca sativa
Lsat_1_v5_gn_0_10580 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 13311131-13316130 Lactuca sativa
Lsat_1_v5_gn_0_10580 10.0kb upstream 10.0kb upstream 13263   true Lsat_1_v8_lg_0: 13316131-13329393 Lactuca sativa
Lsat_1_v5_gn_0_10580 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 13319394-13329393 Lactuca sativa
Lsat_1_v5_gn_0_10580 10.0kb downstream 10.0kb downstream 13263   true Lsat_1_v8_lg_0: 13306131-13319393 Lactuca sativa
Lsat_1_v5_gn_0_10580 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 13306131-13316130 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467674 5263 Asterids View MSA
123751353 5271 Pentapetalae View MSA
122793781 5272 Eudicot View MSA
122043983 5273 Angiosperm View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain