Gene : Lsat_1_v5_gn_0_11501 L. sativa V8
Defline:  (1 of 4) PTHR22958//PTHR22958:SF10 - RELATED TO MULTIFUNCTIONAL CYCLIN-DEPENDENT KINASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  465
Name:  ? Lsat_1_v5_gn_0_11501 Secondary Identifier:  ? PAC:38935738
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7409 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_11501 0.5kb upstream 0.5kb upstream 2819   true Lsat_1_v8_lg_0: 53333216-53336034 Lactuca sativa
Lsat_1_v5_gn_0_11501 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 53333216-53333715 Lactuca sativa
Lsat_1_v5_gn_0_11501 0.5kb downstream 0.5kb downstream 2819   true Lsat_1_v8_lg_0: 53333716-53336534 Lactuca sativa
Lsat_1_v5_gn_0_11501 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 53336035-53336534 Lactuca sativa
Lsat_1_v5_gn_0_11501 1.0kb upstream 1.0kb upstream 3319   true Lsat_1_v8_lg_0: 53332716-53336034 Lactuca sativa
Lsat_1_v5_gn_0_11501 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 53332716-53333715 Lactuca sativa
Lsat_1_v5_gn_0_11501 1.0kb downstream 1.0kb downstream 3319   true Lsat_1_v8_lg_0: 53333716-53337034 Lactuca sativa
Lsat_1_v5_gn_0_11501 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 53336035-53337034 Lactuca sativa
Lsat_1_v5_gn_0_11501 2.0kb upstream 2.0kb upstream 4319   true Lsat_1_v8_lg_0: 53331716-53336034 Lactuca sativa
Lsat_1_v5_gn_0_11501 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 53331716-53333715 Lactuca sativa
Lsat_1_v5_gn_0_11501 2.0kb downstream 2.0kb downstream 4319   true Lsat_1_v8_lg_0: 53333716-53338034 Lactuca sativa
Lsat_1_v5_gn_0_11501 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 53336035-53338034 Lactuca sativa
Lsat_1_v5_gn_0_11501 5.0kb upstream 5.0kb upstream 7319   true Lsat_1_v8_lg_0: 53328716-53336034 Lactuca sativa
Lsat_1_v5_gn_0_11501 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 53328716-53333715 Lactuca sativa
Lsat_1_v5_gn_0_11501 5.0kb downstream 5.0kb downstream 7319   true Lsat_1_v8_lg_0: 53333716-53341034 Lactuca sativa
Lsat_1_v5_gn_0_11501 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 53336035-53341034 Lactuca sativa
Lsat_1_v5_gn_0_11501 10.0kb upstream 10.0kb upstream 12319   true Lsat_1_v8_lg_0: 53323716-53336034 Lactuca sativa
Lsat_1_v5_gn_0_11501 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 53323716-53333715 Lactuca sativa
Lsat_1_v5_gn_0_11501 10.0kb downstream 10.0kb downstream 12319   true Lsat_1_v8_lg_0: 53333716-53346034 Lactuca sativa
Lsat_1_v5_gn_0_11501 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 53336035-53346034 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477532 5263 Asterids View MSA
123747785 5271 Pentapetalae View MSA
122794114 5272 Eudicot View MSA
122041847 5273 Angiosperm View MSA
123429151 5275 Viridiplantae View MSA
121351088 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain