Gene : Lsat_1_v5_gn_0_18481 L. sativa V8
Defline:  (1 of 2) PTHR23023//PTHR23023:SF121 - DIMETHYLANILINE MONOOXYGENASE // INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED Genomic Order:  159
Name:  ? Lsat_1_v5_gn_0_18481 Secondary Identifier:  ? PAC:38935656
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWYDQC-4 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_18481 0.5kb upstream 0.5kb upstream 2180   true Lsat_1_v8_lg_0: 14597560-14599739 Lactuca sativa
Lsat_1_v5_gn_0_18481 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 14599240-14599739 Lactuca sativa
Lsat_1_v5_gn_0_18481 0.5kb downstream 0.5kb downstream 2180   true Lsat_1_v8_lg_0: 14597060-14599239 Lactuca sativa
Lsat_1_v5_gn_0_18481 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 14597060-14597559 Lactuca sativa
Lsat_1_v5_gn_0_18481 1.0kb upstream 1.0kb upstream 2680   true Lsat_1_v8_lg_0: 14597560-14600239 Lactuca sativa
Lsat_1_v5_gn_0_18481 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 14599240-14600239 Lactuca sativa
Lsat_1_v5_gn_0_18481 1.0kb downstream 1.0kb downstream 2680   true Lsat_1_v8_lg_0: 14596560-14599239 Lactuca sativa
Lsat_1_v5_gn_0_18481 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 14596560-14597559 Lactuca sativa
Lsat_1_v5_gn_0_18481 2.0kb upstream 2.0kb upstream 3680   true Lsat_1_v8_lg_0: 14597560-14601239 Lactuca sativa
Lsat_1_v5_gn_0_18481 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 14599240-14601239 Lactuca sativa
Lsat_1_v5_gn_0_18481 2.0kb downstream 2.0kb downstream 3680   true Lsat_1_v8_lg_0: 14595560-14599239 Lactuca sativa
Lsat_1_v5_gn_0_18481 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 14595560-14597559 Lactuca sativa
Lsat_1_v5_gn_0_18481 5.0kb upstream 5.0kb upstream 6680   true Lsat_1_v8_lg_0: 14597560-14604239 Lactuca sativa
Lsat_1_v5_gn_0_18481 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 14599240-14604239 Lactuca sativa
Lsat_1_v5_gn_0_18481 5.0kb downstream 5.0kb downstream 6680   true Lsat_1_v8_lg_0: 14592560-14599239 Lactuca sativa
Lsat_1_v5_gn_0_18481 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 14592560-14597559 Lactuca sativa
Lsat_1_v5_gn_0_18481 10.0kb upstream 10.0kb upstream 11680   true Lsat_1_v8_lg_0: 14597560-14609239 Lactuca sativa
Lsat_1_v5_gn_0_18481 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 14599240-14609239 Lactuca sativa
Lsat_1_v5_gn_0_18481 10.0kb downstream 10.0kb downstream 11680   true Lsat_1_v8_lg_0: 14587560-14599239 Lactuca sativa
Lsat_1_v5_gn_0_18481 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 14587560-14597559 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476856 5263 Asterids View MSA
123749752 5271 Pentapetalae View MSA
122794899 5272 Eudicot View MSA
122047342 5273 Angiosperm View MSA
121310731 5274 Embryophyte View MSA
123348144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain