Gene : Lsat_1_v5_gn_0_18280 L. sativa V8
Genomic Order:  1550 Name:  ? Lsat_1_v5_gn_0_18280
Secondary Identifier:  ? PAC:38948047
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_18280 0.5kb upstream 0.5kb upstream 1636   true Lsat_1_v8_lg_1: 51829501-51831136 Lactuca sativa
Lsat_1_v5_gn_0_18280 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 51830637-51831136 Lactuca sativa
Lsat_1_v5_gn_0_18280 0.5kb downstream 0.5kb downstream 1636   true Lsat_1_v8_lg_1: 51829001-51830636 Lactuca sativa
Lsat_1_v5_gn_0_18280 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 51829001-51829500 Lactuca sativa
Lsat_1_v5_gn_0_18280 1.0kb upstream 1.0kb upstream 2136   true Lsat_1_v8_lg_1: 51829501-51831636 Lactuca sativa
Lsat_1_v5_gn_0_18280 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 51830637-51831636 Lactuca sativa
Lsat_1_v5_gn_0_18280 1.0kb downstream 1.0kb downstream 2136   true Lsat_1_v8_lg_1: 51828501-51830636 Lactuca sativa
Lsat_1_v5_gn_0_18280 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 51828501-51829500 Lactuca sativa
Lsat_1_v5_gn_0_18280 2.0kb upstream 2.0kb upstream 3136   true Lsat_1_v8_lg_1: 51829501-51832636 Lactuca sativa
Lsat_1_v5_gn_0_18280 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 51830637-51832636 Lactuca sativa
Lsat_1_v5_gn_0_18280 2.0kb downstream 2.0kb downstream 3136   true Lsat_1_v8_lg_1: 51827501-51830636 Lactuca sativa
Lsat_1_v5_gn_0_18280 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 51827501-51829500 Lactuca sativa
Lsat_1_v5_gn_0_18280 5.0kb upstream 5.0kb upstream 6136   true Lsat_1_v8_lg_1: 51829501-51835636 Lactuca sativa
Lsat_1_v5_gn_0_18280 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 51830637-51835636 Lactuca sativa
Lsat_1_v5_gn_0_18280 5.0kb downstream 5.0kb downstream 6136   true Lsat_1_v8_lg_1: 51824501-51830636 Lactuca sativa
Lsat_1_v5_gn_0_18280 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 51824501-51829500 Lactuca sativa
Lsat_1_v5_gn_0_18280 10.0kb upstream 10.0kb upstream 11136   true Lsat_1_v8_lg_1: 51829501-51840636 Lactuca sativa
Lsat_1_v5_gn_0_18280 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 51830637-51840636 Lactuca sativa
Lsat_1_v5_gn_0_18280 10.0kb downstream 10.0kb downstream 11136   true Lsat_1_v8_lg_1: 51819501-51830636 Lactuca sativa
Lsat_1_v5_gn_0_18280 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 51819501-51829500 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121441493 5263 Asterids Singleton cluster - no MSA
123741817 5271 Pentapetalae View MSA
122786659 5272 Eudicot View MSA
122043183 5273 Angiosperm View MSA
121310085 5274 Embryophyte View MSA
123347672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain