Gene : Lsat_1_v5_gn_1_103461 L. sativa V8
Defline:  (1 of 7) PF03350 - Uncharacterized protein family, UPF0114 (UPF0114) Genomic Order:  3289
Name:  ? Lsat_1_v5_gn_1_103461 Secondary Identifier:  ? PAC:38948578
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_103461 0.5kb upstream 0.5kb upstream 2400   true Lsat_1_v8_lg_1: 145372768-145375167 Lactuca sativa
Lsat_1_v5_gn_1_103461 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 145372768-145373267 Lactuca sativa
Lsat_1_v5_gn_1_103461 0.5kb downstream 0.5kb downstream 2400   true Lsat_1_v8_lg_1: 145373268-145375667 Lactuca sativa
Lsat_1_v5_gn_1_103461 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 145375168-145375667 Lactuca sativa
Lsat_1_v5_gn_1_103461 1.0kb upstream 1.0kb upstream 2900   true Lsat_1_v8_lg_1: 145372268-145375167 Lactuca sativa
Lsat_1_v5_gn_1_103461 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 145372268-145373267 Lactuca sativa
Lsat_1_v5_gn_1_103461 1.0kb downstream 1.0kb downstream 2900   true Lsat_1_v8_lg_1: 145373268-145376167 Lactuca sativa
Lsat_1_v5_gn_1_103461 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 145375168-145376167 Lactuca sativa
Lsat_1_v5_gn_1_103461 2.0kb upstream 2.0kb upstream 3900   true Lsat_1_v8_lg_1: 145371268-145375167 Lactuca sativa
Lsat_1_v5_gn_1_103461 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 145371268-145373267 Lactuca sativa
Lsat_1_v5_gn_1_103461 2.0kb downstream 2.0kb downstream 3900   true Lsat_1_v8_lg_1: 145373268-145377167 Lactuca sativa
Lsat_1_v5_gn_1_103461 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 145375168-145377167 Lactuca sativa
Lsat_1_v5_gn_1_103461 5.0kb upstream 5.0kb upstream 6900   true Lsat_1_v8_lg_1: 145368268-145375167 Lactuca sativa
Lsat_1_v5_gn_1_103461 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 145368268-145373267 Lactuca sativa
Lsat_1_v5_gn_1_103461 5.0kb downstream 5.0kb downstream 6900   true Lsat_1_v8_lg_1: 145373268-145380167 Lactuca sativa
Lsat_1_v5_gn_1_103461 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 145375168-145380167 Lactuca sativa
Lsat_1_v5_gn_1_103461 10.0kb upstream 10.0kb upstream 11900   true Lsat_1_v8_lg_1: 145363268-145375167 Lactuca sativa
Lsat_1_v5_gn_1_103461 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 145363268-145373267 Lactuca sativa
Lsat_1_v5_gn_1_103461 10.0kb downstream 10.0kb downstream 11900   true Lsat_1_v8_lg_1: 145373268-145385167 Lactuca sativa
Lsat_1_v5_gn_1_103461 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 145375168-145385167 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469375 5263 Asterids View MSA
123737999 5271 Pentapetalae View MSA
122786601 5272 Eudicot View MSA
122048009 5273 Angiosperm View MSA
121348495 5274 Embryophyte View MSA
123426050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain