Gene : Lsat_1_v5_gn_1_10481 L. sativa V8
Defline:  (1 of 4) PTHR10133:SF38 - 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  338
Name:  ? Lsat_1_v5_gn_1_10481 Secondary Identifier:  ? PAC:38947715
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_10481 0.5kb upstream 0.5kb upstream 5592   true Lsat_1_v8_lg_1: 12858700-12864291 Lactuca sativa
Lsat_1_v5_gn_1_10481 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 12858700-12859199 Lactuca sativa
Lsat_1_v5_gn_1_10481 0.5kb downstream 0.5kb downstream 5592   true Lsat_1_v8_lg_1: 12859200-12864791 Lactuca sativa
Lsat_1_v5_gn_1_10481 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 12864292-12864791 Lactuca sativa
Lsat_1_v5_gn_1_10481 1.0kb upstream 1.0kb upstream 6092   true Lsat_1_v8_lg_1: 12858200-12864291 Lactuca sativa
Lsat_1_v5_gn_1_10481 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 12858200-12859199 Lactuca sativa
Lsat_1_v5_gn_1_10481 1.0kb downstream 1.0kb downstream 6092   true Lsat_1_v8_lg_1: 12859200-12865291 Lactuca sativa
Lsat_1_v5_gn_1_10481 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 12864292-12865291 Lactuca sativa
Lsat_1_v5_gn_1_10481 2.0kb upstream 2.0kb upstream 7092   true Lsat_1_v8_lg_1: 12857200-12864291 Lactuca sativa
Lsat_1_v5_gn_1_10481 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 12857200-12859199 Lactuca sativa
Lsat_1_v5_gn_1_10481 2.0kb downstream 2.0kb downstream 7092   true Lsat_1_v8_lg_1: 12859200-12866291 Lactuca sativa
Lsat_1_v5_gn_1_10481 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 12864292-12866291 Lactuca sativa
Lsat_1_v5_gn_1_10481 5.0kb upstream 5.0kb upstream 10092   true Lsat_1_v8_lg_1: 12854200-12864291 Lactuca sativa
Lsat_1_v5_gn_1_10481 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 12854200-12859199 Lactuca sativa
Lsat_1_v5_gn_1_10481 5.0kb downstream 5.0kb downstream 10092   true Lsat_1_v8_lg_1: 12859200-12869291 Lactuca sativa
Lsat_1_v5_gn_1_10481 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 12864292-12869291 Lactuca sativa
Lsat_1_v5_gn_1_10481 10.0kb upstream 10.0kb upstream 15092   true Lsat_1_v8_lg_1: 12849200-12864291 Lactuca sativa
Lsat_1_v5_gn_1_10481 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 12849200-12859199 Lactuca sativa
Lsat_1_v5_gn_1_10481 10.0kb downstream 10.0kb downstream 15092   true Lsat_1_v8_lg_1: 12859200-12874291 Lactuca sativa
Lsat_1_v5_gn_1_10481 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 12864292-12874291 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041187 5273 Angiosperm View MSA
121474159 5263 Asterids View MSA
123740404 5271 Pentapetalae View MSA
122791763 5272 Eudicot View MSA
121344159 5274 Embryophyte View MSA
123425715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain