Gene : Lsat_1_v5_gn_1_10560 L. sativa V8
Defline:  (1 of 2) K12844 - U4/U6 small nuclear ribonucleoprotein PRP31 (PRPF31) Genomic Order:  335
Name:  ? Lsat_1_v5_gn_1_10560 Secondary Identifier:  ? PAC:38942476
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_10560 0.5kb upstream 0.5kb upstream 5413   true Lsat_1_v8_lg_1: 12780899-12786311 Lactuca sativa
Lsat_1_v5_gn_1_10560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 12785812-12786311 Lactuca sativa
Lsat_1_v5_gn_1_10560 0.5kb downstream 0.5kb downstream 5413   true Lsat_1_v8_lg_1: 12780399-12785811 Lactuca sativa
Lsat_1_v5_gn_1_10560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 12780399-12780898 Lactuca sativa
Lsat_1_v5_gn_1_10560 1.0kb upstream 1.0kb upstream 5913   true Lsat_1_v8_lg_1: 12780899-12786811 Lactuca sativa
Lsat_1_v5_gn_1_10560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 12785812-12786811 Lactuca sativa
Lsat_1_v5_gn_1_10560 1.0kb downstream 1.0kb downstream 5913   true Lsat_1_v8_lg_1: 12779899-12785811 Lactuca sativa
Lsat_1_v5_gn_1_10560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 12779899-12780898 Lactuca sativa
Lsat_1_v5_gn_1_10560 2.0kb upstream 2.0kb upstream 6913   true Lsat_1_v8_lg_1: 12780899-12787811 Lactuca sativa
Lsat_1_v5_gn_1_10560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 12785812-12787811 Lactuca sativa
Lsat_1_v5_gn_1_10560 2.0kb downstream 2.0kb downstream 6913   true Lsat_1_v8_lg_1: 12778899-12785811 Lactuca sativa
Lsat_1_v5_gn_1_10560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 12778899-12780898 Lactuca sativa
Lsat_1_v5_gn_1_10560 5.0kb upstream 5.0kb upstream 9913   true Lsat_1_v8_lg_1: 12780899-12790811 Lactuca sativa
Lsat_1_v5_gn_1_10560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 12785812-12790811 Lactuca sativa
Lsat_1_v5_gn_1_10560 5.0kb downstream 5.0kb downstream 9913   true Lsat_1_v8_lg_1: 12775899-12785811 Lactuca sativa
Lsat_1_v5_gn_1_10560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 12775899-12780898 Lactuca sativa
Lsat_1_v5_gn_1_10560 10.0kb upstream 10.0kb upstream 14913   true Lsat_1_v8_lg_1: 12780899-12795811 Lactuca sativa
Lsat_1_v5_gn_1_10560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 12785812-12795811 Lactuca sativa
Lsat_1_v5_gn_1_10560 10.0kb downstream 10.0kb downstream 14913   true Lsat_1_v8_lg_1: 12770899-12785811 Lactuca sativa
Lsat_1_v5_gn_1_10560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 12770899-12780898 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469903 5263 Asterids View MSA
123753460 5271 Pentapetalae View MSA
122792370 5272 Eudicot View MSA
122045972 5273 Angiosperm View MSA
123428992 5275 Viridiplantae View MSA
121345979 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain