Gene : Lsat_1_v5_gn_0_22641 L. sativa V8
Defline:  (1 of 2) K00928 - aspartate kinase (lysC) Genomic Order:  29
Name:  ? Lsat_1_v5_gn_0_22641 Secondary Identifier:  ? PAC:38936248
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa HOMOSERSYN-PWY Lactuca sativa pathologic  
Lsativa PWY-3001 Lactuca sativa pathologic  
Lsativa PWY-5097 Lactuca sativa pathologic  
Lsativa PWY-724 Lactuca sativa pathologic  
Lsativa THRESYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_22641 0.5kb upstream 0.5kb upstream 4636   true Lsat_1_v8_lg_0: 2209886-2214521 Lactuca sativa
Lsat_1_v5_gn_0_22641 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 2209886-2210385 Lactuca sativa
Lsat_1_v5_gn_0_22641 0.5kb downstream 0.5kb downstream 4636   true Lsat_1_v8_lg_0: 2210386-2215021 Lactuca sativa
Lsat_1_v5_gn_0_22641 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 2214522-2215021 Lactuca sativa
Lsat_1_v5_gn_0_22641 1.0kb upstream 1.0kb upstream 5136   true Lsat_1_v8_lg_0: 2209386-2214521 Lactuca sativa
Lsat_1_v5_gn_0_22641 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 2209386-2210385 Lactuca sativa
Lsat_1_v5_gn_0_22641 1.0kb downstream 1.0kb downstream 5136   true Lsat_1_v8_lg_0: 2210386-2215521 Lactuca sativa
Lsat_1_v5_gn_0_22641 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 2214522-2215521 Lactuca sativa
Lsat_1_v5_gn_0_22641 2.0kb upstream 2.0kb upstream 6136   true Lsat_1_v8_lg_0: 2208386-2214521 Lactuca sativa
Lsat_1_v5_gn_0_22641 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 2208386-2210385 Lactuca sativa
Lsat_1_v5_gn_0_22641 2.0kb downstream 2.0kb downstream 6136   true Lsat_1_v8_lg_0: 2210386-2216521 Lactuca sativa
Lsat_1_v5_gn_0_22641 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 2214522-2216521 Lactuca sativa
Lsat_1_v5_gn_0_22641 5.0kb upstream 5.0kb upstream 9136   true Lsat_1_v8_lg_0: 2205386-2214521 Lactuca sativa
Lsat_1_v5_gn_0_22641 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 2205386-2210385 Lactuca sativa
Lsat_1_v5_gn_0_22641 5.0kb downstream 5.0kb downstream 9136   true Lsat_1_v8_lg_0: 2210386-2219521 Lactuca sativa
Lsat_1_v5_gn_0_22641 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 2214522-2219521 Lactuca sativa
Lsat_1_v5_gn_0_22641 10.0kb upstream 10.0kb upstream 14136   true Lsat_1_v8_lg_0: 2200386-2214521 Lactuca sativa
Lsat_1_v5_gn_0_22641 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 2200386-2210385 Lactuca sativa
Lsat_1_v5_gn_0_22641 10.0kb downstream 10.0kb downstream 14136   true Lsat_1_v8_lg_0: 2210386-2224521 Lactuca sativa
Lsat_1_v5_gn_0_22641 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 2214522-2224521 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471657 5263 Asterids View MSA
123738935 5271 Pentapetalae View MSA
122796231 5272 Eudicot View MSA
122050797 5273 Angiosperm View MSA
121346150 5274 Embryophyte View MSA
123424787 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain