Gene : Lsat_1_v5_gn_0_26040 L. sativa V8
Defline:  (1 of 3) K10808 - ribonucleoside-diphosphate reductase subunit M2 (RRM2) Genomic Order:  502
Name:  ? Lsat_1_v5_gn_0_26040 Secondary Identifier:  ? PAC:38935566
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6126 Lactuca sativa pathologic  
Lsativa PWY-7184 Lactuca sativa pathologic  
Lsativa PWY-7210 Lactuca sativa pathologic  
Lsativa PWY-7211 Lactuca sativa pathologic  
Lsativa PWY-7220 Lactuca sativa pathologic  
Lsativa PWY-7222 Lactuca sativa pathologic  
Lsativa PWY-7226 Lactuca sativa pathologic  
Lsativa PWY-7227 Lactuca sativa pathologic  
Lsativa PWY-7228 Lactuca sativa pathologic  
Lsativa PWY-7229 Lactuca sativa pathologic  
Lsativa PWY-841 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_26040 0.5kb upstream 0.5kb upstream 1706   true Lsat_1_v8_lg_0: 56687178-56688883 Lactuca sativa
Lsat_1_v5_gn_0_26040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 56687178-56687677 Lactuca sativa
Lsat_1_v5_gn_0_26040 0.5kb downstream 0.5kb downstream 1706   true Lsat_1_v8_lg_0: 56687678-56689383 Lactuca sativa
Lsat_1_v5_gn_0_26040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 56688884-56689383 Lactuca sativa
Lsat_1_v5_gn_0_26040 1.0kb upstream 1.0kb upstream 2206   true Lsat_1_v8_lg_0: 56686678-56688883 Lactuca sativa
Lsat_1_v5_gn_0_26040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 56686678-56687677 Lactuca sativa
Lsat_1_v5_gn_0_26040 1.0kb downstream 1.0kb downstream 2206   true Lsat_1_v8_lg_0: 56687678-56689883 Lactuca sativa
Lsat_1_v5_gn_0_26040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 56688884-56689883 Lactuca sativa
Lsat_1_v5_gn_0_26040 2.0kb upstream 2.0kb upstream 3206   true Lsat_1_v8_lg_0: 56685678-56688883 Lactuca sativa
Lsat_1_v5_gn_0_26040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 56685678-56687677 Lactuca sativa
Lsat_1_v5_gn_0_26040 2.0kb downstream 2.0kb downstream 3206   true Lsat_1_v8_lg_0: 56687678-56690883 Lactuca sativa
Lsat_1_v5_gn_0_26040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 56688884-56690883 Lactuca sativa
Lsat_1_v5_gn_0_26040 5.0kb upstream 5.0kb upstream 6206   true Lsat_1_v8_lg_0: 56682678-56688883 Lactuca sativa
Lsat_1_v5_gn_0_26040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 56682678-56687677 Lactuca sativa
Lsat_1_v5_gn_0_26040 5.0kb downstream 5.0kb downstream 6206   true Lsat_1_v8_lg_0: 56687678-56693883 Lactuca sativa
Lsat_1_v5_gn_0_26040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 56688884-56693883 Lactuca sativa
Lsat_1_v5_gn_0_26040 10.0kb upstream 10.0kb upstream 11206   true Lsat_1_v8_lg_0: 56677678-56688883 Lactuca sativa
Lsat_1_v5_gn_0_26040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 56677678-56687677 Lactuca sativa
Lsat_1_v5_gn_0_26040 10.0kb downstream 10.0kb downstream 11206   true Lsat_1_v8_lg_0: 56687678-56698883 Lactuca sativa
Lsat_1_v5_gn_0_26040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 56688884-56698883 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477817 5263 Asterids View MSA
123737275 5271 Pentapetalae View MSA
122787137 5272 Eudicot View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain