Gene : Lsat_1_v5_gn_0_2580 L. sativa V8
Defline:  (1 of 2) K02262 - cytochrome c oxidase subunit 3 (COX3) Genomic Order:  513
Name:  ? Lsat_1_v5_gn_0_2580 Secondary Identifier:  ? PAC:38936254
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-3781 Lactuca sativa pathologic  
Lsativa PWY-7279 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_2580 0.5kb upstream 0.5kb upstream 1402   true Lsat_1_v8_lg_0: 57558334-57559735 Lactuca sativa
Lsat_1_v5_gn_0_2580 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 57558334-57558833 Lactuca sativa
Lsat_1_v5_gn_0_2580 0.5kb downstream 0.5kb downstream 1402   true Lsat_1_v8_lg_0: 57558834-57560235 Lactuca sativa
Lsat_1_v5_gn_0_2580 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 57559736-57560235 Lactuca sativa
Lsat_1_v5_gn_0_2580 1.0kb upstream 1.0kb upstream 1902   true Lsat_1_v8_lg_0: 57557834-57559735 Lactuca sativa
Lsat_1_v5_gn_0_2580 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 57557834-57558833 Lactuca sativa
Lsat_1_v5_gn_0_2580 1.0kb downstream 1.0kb downstream 1902   true Lsat_1_v8_lg_0: 57558834-57560735 Lactuca sativa
Lsat_1_v5_gn_0_2580 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 57559736-57560735 Lactuca sativa
Lsat_1_v5_gn_0_2580 2.0kb upstream 2.0kb upstream 2902   true Lsat_1_v8_lg_0: 57556834-57559735 Lactuca sativa
Lsat_1_v5_gn_0_2580 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 57556834-57558833 Lactuca sativa
Lsat_1_v5_gn_0_2580 2.0kb downstream 2.0kb downstream 2902   true Lsat_1_v8_lg_0: 57558834-57561735 Lactuca sativa
Lsat_1_v5_gn_0_2580 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 57559736-57561735 Lactuca sativa
Lsat_1_v5_gn_0_2580 5.0kb upstream 5.0kb upstream 5902   true Lsat_1_v8_lg_0: 57553834-57559735 Lactuca sativa
Lsat_1_v5_gn_0_2580 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 57553834-57558833 Lactuca sativa
Lsat_1_v5_gn_0_2580 5.0kb downstream 5.0kb downstream 5902   true Lsat_1_v8_lg_0: 57558834-57564735 Lactuca sativa
Lsat_1_v5_gn_0_2580 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 57559736-57564735 Lactuca sativa
Lsat_1_v5_gn_0_2580 10.0kb upstream 10.0kb upstream 10902   true Lsat_1_v8_lg_0: 57548834-57559735 Lactuca sativa
Lsat_1_v5_gn_0_2580 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 57548834-57558833 Lactuca sativa
Lsat_1_v5_gn_0_2580 10.0kb downstream 10.0kb downstream 10902   true Lsat_1_v8_lg_0: 57558834-57569735 Lactuca sativa
Lsat_1_v5_gn_0_2580 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 57559736-57569735 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121464126 5263 Asterids View MSA
123753546 5271 Pentapetalae View MSA
122786162 5272 Eudicot View MSA
122050963 5273 Angiosperm View MSA
121348326 5274 Embryophyte View MSA
123426097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain