Gene : Lsat_1_v5_gn_0_31360 L. sativa V8
Defline:  (1 of 6) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  306
Name:  ? Lsat_1_v5_gn_0_31360 Secondary Identifier:  ? PAC:38935703
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_31360 0.5kb upstream 0.5kb upstream 2540   true Lsat_1_v8_lg_0: 28439995-28442534 Lactuca sativa
Lsat_1_v5_gn_0_31360 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 28442035-28442534 Lactuca sativa
Lsat_1_v5_gn_0_31360 0.5kb downstream 0.5kb downstream 2540   true Lsat_1_v8_lg_0: 28439495-28442034 Lactuca sativa
Lsat_1_v5_gn_0_31360 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 28439495-28439994 Lactuca sativa
Lsat_1_v5_gn_0_31360 1.0kb upstream 1.0kb upstream 3040   true Lsat_1_v8_lg_0: 28439995-28443034 Lactuca sativa
Lsat_1_v5_gn_0_31360 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 28442035-28443034 Lactuca sativa
Lsat_1_v5_gn_0_31360 1.0kb downstream 1.0kb downstream 3040   true Lsat_1_v8_lg_0: 28438995-28442034 Lactuca sativa
Lsat_1_v5_gn_0_31360 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 28438995-28439994 Lactuca sativa
Lsat_1_v5_gn_0_31360 2.0kb upstream 2.0kb upstream 4040   true Lsat_1_v8_lg_0: 28439995-28444034 Lactuca sativa
Lsat_1_v5_gn_0_31360 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 28442035-28444034 Lactuca sativa
Lsat_1_v5_gn_0_31360 2.0kb downstream 2.0kb downstream 4040   true Lsat_1_v8_lg_0: 28437995-28442034 Lactuca sativa
Lsat_1_v5_gn_0_31360 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 28437995-28439994 Lactuca sativa
Lsat_1_v5_gn_0_31360 5.0kb upstream 5.0kb upstream 7040   true Lsat_1_v8_lg_0: 28439995-28447034 Lactuca sativa
Lsat_1_v5_gn_0_31360 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 28442035-28447034 Lactuca sativa
Lsat_1_v5_gn_0_31360 5.0kb downstream 5.0kb downstream 7040   true Lsat_1_v8_lg_0: 28434995-28442034 Lactuca sativa
Lsat_1_v5_gn_0_31360 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 28434995-28439994 Lactuca sativa
Lsat_1_v5_gn_0_31360 10.0kb upstream 10.0kb upstream 12040   true Lsat_1_v8_lg_0: 28439995-28452034 Lactuca sativa
Lsat_1_v5_gn_0_31360 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 28442035-28452034 Lactuca sativa
Lsat_1_v5_gn_0_31360 10.0kb downstream 10.0kb downstream 12040   true Lsat_1_v8_lg_0: 28429995-28442034 Lactuca sativa
Lsat_1_v5_gn_0_31360 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 28429995-28439994 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469500 5263 Asterids View MSA
123749581 5271 Pentapetalae View MSA
122787342 5272 Eudicot View MSA
122046026 5273 Angiosperm View MSA
121350732 5274 Embryophyte View MSA
123426159 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain