Gene : Lsat_1_v5_gn_0_35680 L. sativa V8
Defline:  (1 of 1) PF02544//PF06966 - 3-oxo-5-alpha-steroid 4-dehydrogenase (Steroid_dh) // Protein of unknown function (DUF1295) (DUF1295) Genomic Order:  4
Name:  ? Lsat_1_v5_gn_0_35680 Secondary Identifier:  ? PAC:38935910
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_35680 0.5kb upstream 0.5kb upstream 2024   true Lsat_1_v8_lg_0: 288625-290648 Lactuca sativa
Lsat_1_v5_gn_0_35680 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 290149-290648 Lactuca sativa
Lsat_1_v5_gn_0_35680 0.5kb downstream 0.5kb downstream 2024   true Lsat_1_v8_lg_0: 288125-290148 Lactuca sativa
Lsat_1_v5_gn_0_35680 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 288125-288624 Lactuca sativa
Lsat_1_v5_gn_0_35680 1.0kb upstream 1.0kb upstream 2524   true Lsat_1_v8_lg_0: 288625-291148 Lactuca sativa
Lsat_1_v5_gn_0_35680 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 290149-291148 Lactuca sativa
Lsat_1_v5_gn_0_35680 1.0kb downstream 1.0kb downstream 2524   true Lsat_1_v8_lg_0: 287625-290148 Lactuca sativa
Lsat_1_v5_gn_0_35680 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 287625-288624 Lactuca sativa
Lsat_1_v5_gn_0_35680 2.0kb upstream 2.0kb upstream 3524   true Lsat_1_v8_lg_0: 288625-292148 Lactuca sativa
Lsat_1_v5_gn_0_35680 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 290149-292148 Lactuca sativa
Lsat_1_v5_gn_0_35680 2.0kb downstream 2.0kb downstream 3524   true Lsat_1_v8_lg_0: 286625-290148 Lactuca sativa
Lsat_1_v5_gn_0_35680 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 286625-288624 Lactuca sativa
Lsat_1_v5_gn_0_35680 5.0kb upstream 5.0kb upstream 6524   true Lsat_1_v8_lg_0: 288625-295148 Lactuca sativa
Lsat_1_v5_gn_0_35680 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 290149-295148 Lactuca sativa
Lsat_1_v5_gn_0_35680 5.0kb downstream 5.0kb downstream 6524   true Lsat_1_v8_lg_0: 283625-290148 Lactuca sativa
Lsat_1_v5_gn_0_35680 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 283625-288624 Lactuca sativa
Lsat_1_v5_gn_0_35680 10.0kb upstream 10.0kb upstream 11524   true Lsat_1_v8_lg_0: 288625-300148 Lactuca sativa
Lsat_1_v5_gn_0_35680 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 290149-300148 Lactuca sativa
Lsat_1_v5_gn_0_35680 10.0kb downstream 10.0kb downstream 11524   true Lsat_1_v8_lg_0: 278625-290148 Lactuca sativa
Lsat_1_v5_gn_0_35680 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 278625-288624 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469994 5263 Asterids View MSA
123751267 5271 Pentapetalae View MSA
122793833 5272 Eudicot View MSA
122045974 5273 Angiosperm View MSA
121350714 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain