Gene : Lsat_1_v5_gn_0_46101 L. sativa V8
Defline:  (1 of 4) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Genomic Order:  307
Name:  ? Lsat_1_v5_gn_0_46101 Secondary Identifier:  ? PAC:38935730
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7560 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_46101 0.5kb upstream 0.5kb upstream 1574   true Lsat_1_v8_lg_0: 28691882-28693455 Lactuca sativa
Lsat_1_v5_gn_0_46101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 28692956-28693455 Lactuca sativa
Lsat_1_v5_gn_0_46101 0.5kb downstream 0.5kb downstream 1574   true Lsat_1_v8_lg_0: 28691382-28692955 Lactuca sativa
Lsat_1_v5_gn_0_46101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 28691382-28691881 Lactuca sativa
Lsat_1_v5_gn_0_46101 1.0kb upstream 1.0kb upstream 2074   true Lsat_1_v8_lg_0: 28691882-28693955 Lactuca sativa
Lsat_1_v5_gn_0_46101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 28692956-28693955 Lactuca sativa
Lsat_1_v5_gn_0_46101 1.0kb downstream 1.0kb downstream 2074   true Lsat_1_v8_lg_0: 28690882-28692955 Lactuca sativa
Lsat_1_v5_gn_0_46101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 28690882-28691881 Lactuca sativa
Lsat_1_v5_gn_0_46101 2.0kb upstream 2.0kb upstream 3074   true Lsat_1_v8_lg_0: 28691882-28694955 Lactuca sativa
Lsat_1_v5_gn_0_46101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 28692956-28694955 Lactuca sativa
Lsat_1_v5_gn_0_46101 2.0kb downstream 2.0kb downstream 3074   true Lsat_1_v8_lg_0: 28689882-28692955 Lactuca sativa
Lsat_1_v5_gn_0_46101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 28689882-28691881 Lactuca sativa
Lsat_1_v5_gn_0_46101 5.0kb upstream 5.0kb upstream 6074   true Lsat_1_v8_lg_0: 28691882-28697955 Lactuca sativa
Lsat_1_v5_gn_0_46101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 28692956-28697955 Lactuca sativa
Lsat_1_v5_gn_0_46101 5.0kb downstream 5.0kb downstream 6074   true Lsat_1_v8_lg_0: 28686882-28692955 Lactuca sativa
Lsat_1_v5_gn_0_46101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 28686882-28691881 Lactuca sativa
Lsat_1_v5_gn_0_46101 10.0kb upstream 10.0kb upstream 11074   true Lsat_1_v8_lg_0: 28691882-28702955 Lactuca sativa
Lsat_1_v5_gn_0_46101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 28692956-28702955 Lactuca sativa
Lsat_1_v5_gn_0_46101 10.0kb downstream 10.0kb downstream 11074   true Lsat_1_v8_lg_0: 28681882-28692955 Lactuca sativa
Lsat_1_v5_gn_0_46101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 28681882-28691881 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041406 5273 Angiosperm View MSA
121454175 5263 Asterids View MSA
123736883 5271 Pentapetalae View MSA
122791920 5272 Eudicot View MSA
121344534 5274 Embryophyte View MSA
123424385 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain