Gene : Lsat_1_v5_gn_0_460 L. sativa V8
Defline:  (1 of 1) K17262 - tubulin-folding cofactor B (TBCB, CKAP1, ALF1) Genomic Order:  211
Name:  ? Lsat_1_v5_gn_0_460 Secondary Identifier:  ? PAC:38936147
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_460 0.5kb upstream 0.5kb upstream 2412   true Lsat_1_v8_lg_0: 17498526-17500937 Lactuca sativa
Lsat_1_v5_gn_0_460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_0: 17500438-17500937 Lactuca sativa
Lsat_1_v5_gn_0_460 0.5kb downstream 0.5kb downstream 2412   true Lsat_1_v8_lg_0: 17498026-17500437 Lactuca sativa
Lsat_1_v5_gn_0_460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_0: 17498026-17498525 Lactuca sativa
Lsat_1_v5_gn_0_460 1.0kb upstream 1.0kb upstream 2912   true Lsat_1_v8_lg_0: 17498526-17501437 Lactuca sativa
Lsat_1_v5_gn_0_460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_0: 17500438-17501437 Lactuca sativa
Lsat_1_v5_gn_0_460 1.0kb downstream 1.0kb downstream 2912   true Lsat_1_v8_lg_0: 17497526-17500437 Lactuca sativa
Lsat_1_v5_gn_0_460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_0: 17497526-17498525 Lactuca sativa
Lsat_1_v5_gn_0_460 2.0kb upstream 2.0kb upstream 3912   true Lsat_1_v8_lg_0: 17498526-17502437 Lactuca sativa
Lsat_1_v5_gn_0_460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_0: 17500438-17502437 Lactuca sativa
Lsat_1_v5_gn_0_460 2.0kb downstream 2.0kb downstream 3912   true Lsat_1_v8_lg_0: 17496526-17500437 Lactuca sativa
Lsat_1_v5_gn_0_460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_0: 17496526-17498525 Lactuca sativa
Lsat_1_v5_gn_0_460 5.0kb upstream 5.0kb upstream 6912   true Lsat_1_v8_lg_0: 17498526-17505437 Lactuca sativa
Lsat_1_v5_gn_0_460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_0: 17500438-17505437 Lactuca sativa
Lsat_1_v5_gn_0_460 5.0kb downstream 5.0kb downstream 6912   true Lsat_1_v8_lg_0: 17493526-17500437 Lactuca sativa
Lsat_1_v5_gn_0_460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_0: 17493526-17498525 Lactuca sativa
Lsat_1_v5_gn_0_460 10.0kb upstream 10.0kb upstream 11912   true Lsat_1_v8_lg_0: 17498526-17510437 Lactuca sativa
Lsat_1_v5_gn_0_460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_0: 17500438-17510437 Lactuca sativa
Lsat_1_v5_gn_0_460 10.0kb downstream 10.0kb downstream 11912   true Lsat_1_v8_lg_0: 17488526-17500437 Lactuca sativa
Lsat_1_v5_gn_0_460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_0: 17488526-17498525 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469640 5263 Asterids View MSA
123738129 5271 Pentapetalae View MSA
122795484 5272 Eudicot View MSA
122045722 5273 Angiosperm View MSA
121345954 5274 Embryophyte View MSA
123423760 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain