Gene : Lsat_1_v5_gn_1_120961 L. sativa V8
Defline:  (1 of 6) PF04578//PF13968 - Protein of unknown function, DUF594 (DUF594) // Domain of unknown function (DUF4220) (DUF4220) Genomic Order:  3865
Name:  ? Lsat_1_v5_gn_1_120961 Secondary Identifier:  ? PAC:38945223
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_120961 0.5kb upstream 0.5kb upstream 2675   true Lsat_1_v8_lg_1: 208613068-208615742 Lactuca sativa
Lsat_1_v5_gn_1_120961 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 208615243-208615742 Lactuca sativa
Lsat_1_v5_gn_1_120961 0.5kb downstream 0.5kb downstream 2675   true Lsat_1_v8_lg_1: 208612568-208615242 Lactuca sativa
Lsat_1_v5_gn_1_120961 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 208612568-208613067 Lactuca sativa
Lsat_1_v5_gn_1_120961 1.0kb upstream 1.0kb upstream 3175   true Lsat_1_v8_lg_1: 208613068-208616242 Lactuca sativa
Lsat_1_v5_gn_1_120961 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 208615243-208616242 Lactuca sativa
Lsat_1_v5_gn_1_120961 1.0kb downstream 1.0kb downstream 3175   true Lsat_1_v8_lg_1: 208612068-208615242 Lactuca sativa
Lsat_1_v5_gn_1_120961 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 208612068-208613067 Lactuca sativa
Lsat_1_v5_gn_1_120961 2.0kb upstream 2.0kb upstream 4175   true Lsat_1_v8_lg_1: 208613068-208617242 Lactuca sativa
Lsat_1_v5_gn_1_120961 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 208615243-208617242 Lactuca sativa
Lsat_1_v5_gn_1_120961 2.0kb downstream 2.0kb downstream 4175   true Lsat_1_v8_lg_1: 208611068-208615242 Lactuca sativa
Lsat_1_v5_gn_1_120961 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 208611068-208613067 Lactuca sativa
Lsat_1_v5_gn_1_120961 5.0kb upstream 5.0kb upstream 7175   true Lsat_1_v8_lg_1: 208613068-208620242 Lactuca sativa
Lsat_1_v5_gn_1_120961 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 208615243-208620242 Lactuca sativa
Lsat_1_v5_gn_1_120961 5.0kb downstream 5.0kb downstream 7175   true Lsat_1_v8_lg_1: 208608068-208615242 Lactuca sativa
Lsat_1_v5_gn_1_120961 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 208608068-208613067 Lactuca sativa
Lsat_1_v5_gn_1_120961 10.0kb upstream 10.0kb upstream 12175   true Lsat_1_v8_lg_1: 208613068-208625242 Lactuca sativa
Lsat_1_v5_gn_1_120961 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 208615243-208625242 Lactuca sativa
Lsat_1_v5_gn_1_120961 10.0kb downstream 10.0kb downstream 12175   true Lsat_1_v8_lg_1: 208603068-208615242 Lactuca sativa
Lsat_1_v5_gn_1_120961 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 208603068-208613067 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
121481406 5263 Asterids View MSA
123752826 5271 Pentapetalae View MSA
122795885 5272 Eudicot View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain