Gene : Lsat_1_v5_gn_1_107200 L. sativa V8
Defline:  (1 of 6) K19045 - E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:6.3.2.19] (BB) Genomic Order:  3374
Name:  ? Lsat_1_v5_gn_1_107200 Secondary Identifier:  ? PAC:38945090
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_107200 0.5kb upstream 0.5kb upstream 4967   true Lsat_1_v8_lg_1: 154755656-154760622 Lactuca sativa
Lsat_1_v5_gn_1_107200 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 154760123-154760622 Lactuca sativa
Lsat_1_v5_gn_1_107200 0.5kb downstream 0.5kb downstream 4967   true Lsat_1_v8_lg_1: 154755156-154760122 Lactuca sativa
Lsat_1_v5_gn_1_107200 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 154755156-154755655 Lactuca sativa
Lsat_1_v5_gn_1_107200 1.0kb upstream 1.0kb upstream 5467   true Lsat_1_v8_lg_1: 154755656-154761122 Lactuca sativa
Lsat_1_v5_gn_1_107200 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 154760123-154761122 Lactuca sativa
Lsat_1_v5_gn_1_107200 1.0kb downstream 1.0kb downstream 5467   true Lsat_1_v8_lg_1: 154754656-154760122 Lactuca sativa
Lsat_1_v5_gn_1_107200 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 154754656-154755655 Lactuca sativa
Lsat_1_v5_gn_1_107200 2.0kb upstream 2.0kb upstream 6467   true Lsat_1_v8_lg_1: 154755656-154762122 Lactuca sativa
Lsat_1_v5_gn_1_107200 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 154760123-154762122 Lactuca sativa
Lsat_1_v5_gn_1_107200 2.0kb downstream 2.0kb downstream 6467   true Lsat_1_v8_lg_1: 154753656-154760122 Lactuca sativa
Lsat_1_v5_gn_1_107200 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 154753656-154755655 Lactuca sativa
Lsat_1_v5_gn_1_107200 5.0kb upstream 5.0kb upstream 9467   true Lsat_1_v8_lg_1: 154755656-154765122 Lactuca sativa
Lsat_1_v5_gn_1_107200 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 154760123-154765122 Lactuca sativa
Lsat_1_v5_gn_1_107200 5.0kb downstream 5.0kb downstream 9467   true Lsat_1_v8_lg_1: 154750656-154760122 Lactuca sativa
Lsat_1_v5_gn_1_107200 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 154750656-154755655 Lactuca sativa
Lsat_1_v5_gn_1_107200 10.0kb upstream 10.0kb upstream 14467   true Lsat_1_v8_lg_1: 154755656-154770122 Lactuca sativa
Lsat_1_v5_gn_1_107200 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 154760123-154770122 Lactuca sativa
Lsat_1_v5_gn_1_107200 10.0kb downstream 10.0kb downstream 14467   true Lsat_1_v8_lg_1: 154745656-154760122 Lactuca sativa
Lsat_1_v5_gn_1_107200 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 154745656-154755655 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466688 5263 Asterids View MSA
123752046 5271 Pentapetalae View MSA
122792578 5272 Eudicot View MSA
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain