Gene : Lsat_1_v5_gn_1_106860 L. sativa V8
Defline:  (1 of 3) PTHR11206:SF156 - MATE EFFLUX FAMILY PROTEIN FRD3 Genomic Order:  3360
Name:  ? Lsat_1_v5_gn_1_106860 Secondary Identifier:  ? PAC:38944437
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_106860 0.5kb upstream 0.5kb upstream 3837   true Lsat_1_v8_lg_1: 152507691-152511527 Lactuca sativa
Lsat_1_v5_gn_1_106860 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 152507691-152508190 Lactuca sativa
Lsat_1_v5_gn_1_106860 0.5kb downstream 0.5kb downstream 3837   true Lsat_1_v8_lg_1: 152508191-152512027 Lactuca sativa
Lsat_1_v5_gn_1_106860 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 152511528-152512027 Lactuca sativa
Lsat_1_v5_gn_1_106860 1.0kb upstream 1.0kb upstream 4337   true Lsat_1_v8_lg_1: 152507191-152511527 Lactuca sativa
Lsat_1_v5_gn_1_106860 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 152507191-152508190 Lactuca sativa
Lsat_1_v5_gn_1_106860 1.0kb downstream 1.0kb downstream 4337   true Lsat_1_v8_lg_1: 152508191-152512527 Lactuca sativa
Lsat_1_v5_gn_1_106860 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 152511528-152512527 Lactuca sativa
Lsat_1_v5_gn_1_106860 2.0kb upstream 2.0kb upstream 5337   true Lsat_1_v8_lg_1: 152506191-152511527 Lactuca sativa
Lsat_1_v5_gn_1_106860 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 152506191-152508190 Lactuca sativa
Lsat_1_v5_gn_1_106860 2.0kb downstream 2.0kb downstream 5337   true Lsat_1_v8_lg_1: 152508191-152513527 Lactuca sativa
Lsat_1_v5_gn_1_106860 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 152511528-152513527 Lactuca sativa
Lsat_1_v5_gn_1_106860 5.0kb upstream 5.0kb upstream 8337   true Lsat_1_v8_lg_1: 152503191-152511527 Lactuca sativa
Lsat_1_v5_gn_1_106860 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 152503191-152508190 Lactuca sativa
Lsat_1_v5_gn_1_106860 5.0kb downstream 5.0kb downstream 8337   true Lsat_1_v8_lg_1: 152508191-152516527 Lactuca sativa
Lsat_1_v5_gn_1_106860 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 152511528-152516527 Lactuca sativa
Lsat_1_v5_gn_1_106860 10.0kb upstream 10.0kb upstream 13337   true Lsat_1_v8_lg_1: 152498191-152511527 Lactuca sativa
Lsat_1_v5_gn_1_106860 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 152498191-152508190 Lactuca sativa
Lsat_1_v5_gn_1_106860 10.0kb downstream 10.0kb downstream 13337   true Lsat_1_v8_lg_1: 152508191-152521527 Lactuca sativa
Lsat_1_v5_gn_1_106860 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 152511528-152521527 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470858 5263 Asterids View MSA
123753087 5271 Pentapetalae View MSA
122795715 5272 Eudicot View MSA
122045174 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain