Gene : Lsat_1_v5_gn_1_108541 L. sativa V8
Defline:  (1 of 1) K15171 - transcription elongation factor SPT4 (SUPT4H1, SPT4) Genomic Order:  3392
Name:  ? Lsat_1_v5_gn_1_108541 Secondary Identifier:  ? PAC:38944957
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_108541 0.5kb upstream 0.5kb upstream 2252   true Lsat_1_v8_lg_1: 156513096-156515347 Lactuca sativa
Lsat_1_v5_gn_1_108541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 156513096-156513595 Lactuca sativa
Lsat_1_v5_gn_1_108541 0.5kb downstream 0.5kb downstream 2252   true Lsat_1_v8_lg_1: 156513596-156515847 Lactuca sativa
Lsat_1_v5_gn_1_108541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 156515348-156515847 Lactuca sativa
Lsat_1_v5_gn_1_108541 1.0kb upstream 1.0kb upstream 2752   true Lsat_1_v8_lg_1: 156512596-156515347 Lactuca sativa
Lsat_1_v5_gn_1_108541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 156512596-156513595 Lactuca sativa
Lsat_1_v5_gn_1_108541 1.0kb downstream 1.0kb downstream 2752   true Lsat_1_v8_lg_1: 156513596-156516347 Lactuca sativa
Lsat_1_v5_gn_1_108541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 156515348-156516347 Lactuca sativa
Lsat_1_v5_gn_1_108541 2.0kb upstream 2.0kb upstream 3752   true Lsat_1_v8_lg_1: 156511596-156515347 Lactuca sativa
Lsat_1_v5_gn_1_108541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 156511596-156513595 Lactuca sativa
Lsat_1_v5_gn_1_108541 2.0kb downstream 2.0kb downstream 3752   true Lsat_1_v8_lg_1: 156513596-156517347 Lactuca sativa
Lsat_1_v5_gn_1_108541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 156515348-156517347 Lactuca sativa
Lsat_1_v5_gn_1_108541 5.0kb upstream 5.0kb upstream 6752   true Lsat_1_v8_lg_1: 156508596-156515347 Lactuca sativa
Lsat_1_v5_gn_1_108541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 156508596-156513595 Lactuca sativa
Lsat_1_v5_gn_1_108541 5.0kb downstream 5.0kb downstream 6752   true Lsat_1_v8_lg_1: 156513596-156520347 Lactuca sativa
Lsat_1_v5_gn_1_108541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 156515348-156520347 Lactuca sativa
Lsat_1_v5_gn_1_108541 10.0kb upstream 10.0kb upstream 11752   true Lsat_1_v8_lg_1: 156503596-156515347 Lactuca sativa
Lsat_1_v5_gn_1_108541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 156503596-156513595 Lactuca sativa
Lsat_1_v5_gn_1_108541 10.0kb downstream 10.0kb downstream 11752   true Lsat_1_v8_lg_1: 156513596-156525347 Lactuca sativa
Lsat_1_v5_gn_1_108541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 156515348-156525347 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474645 5263 Asterids View MSA
123740657 5271 Pentapetalae View MSA
122786663 5272 Eudicot View MSA
122042342 5273 Angiosperm View MSA
121345840 5274 Embryophyte View MSA
123426410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain