Gene : Lsat_1_v5_gn_1_108561 L. sativa V8
Defline:  (1 of 12) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  3434
Name:  ? Lsat_1_v5_gn_1_108561 Secondary Identifier:  ? PAC:38943096
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_108561 0.5kb upstream 0.5kb upstream 2516   true Lsat_1_v8_lg_1: 162393320-162395835 Lactuca sativa
Lsat_1_v5_gn_1_108561 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 162395336-162395835 Lactuca sativa
Lsat_1_v5_gn_1_108561 0.5kb downstream 0.5kb downstream 2516   true Lsat_1_v8_lg_1: 162392820-162395335 Lactuca sativa
Lsat_1_v5_gn_1_108561 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 162392820-162393319 Lactuca sativa
Lsat_1_v5_gn_1_108561 1.0kb upstream 1.0kb upstream 3016   true Lsat_1_v8_lg_1: 162393320-162396335 Lactuca sativa
Lsat_1_v5_gn_1_108561 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 162395336-162396335 Lactuca sativa
Lsat_1_v5_gn_1_108561 1.0kb downstream 1.0kb downstream 3016   true Lsat_1_v8_lg_1: 162392320-162395335 Lactuca sativa
Lsat_1_v5_gn_1_108561 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 162392320-162393319 Lactuca sativa
Lsat_1_v5_gn_1_108561 2.0kb upstream 2.0kb upstream 4016   true Lsat_1_v8_lg_1: 162393320-162397335 Lactuca sativa
Lsat_1_v5_gn_1_108561 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 162395336-162397335 Lactuca sativa
Lsat_1_v5_gn_1_108561 2.0kb downstream 2.0kb downstream 4016   true Lsat_1_v8_lg_1: 162391320-162395335 Lactuca sativa
Lsat_1_v5_gn_1_108561 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 162391320-162393319 Lactuca sativa
Lsat_1_v5_gn_1_108561 5.0kb upstream 5.0kb upstream 7016   true Lsat_1_v8_lg_1: 162393320-162400335 Lactuca sativa
Lsat_1_v5_gn_1_108561 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 162395336-162400335 Lactuca sativa
Lsat_1_v5_gn_1_108561 5.0kb downstream 5.0kb downstream 7016   true Lsat_1_v8_lg_1: 162388320-162395335 Lactuca sativa
Lsat_1_v5_gn_1_108561 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 162388320-162393319 Lactuca sativa
Lsat_1_v5_gn_1_108561 10.0kb upstream 10.0kb upstream 12016   true Lsat_1_v8_lg_1: 162393320-162405335 Lactuca sativa
Lsat_1_v5_gn_1_108561 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 162395336-162405335 Lactuca sativa
Lsat_1_v5_gn_1_108561 10.0kb downstream 10.0kb downstream 12016   true Lsat_1_v8_lg_1: 162383320-162395335 Lactuca sativa
Lsat_1_v5_gn_1_108561 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 162383320-162393319 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479434 5263 Asterids View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain