Gene : Lsat_1_v5_gn_1_110320 L. sativa V8
Defline:  (1 of 1) PTHR12601//PTHR12601:SF6 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // CLUSTERED MITOCHONDRIA PROTEIN HOMOLOG Genomic Order:  3400
Name:  ? Lsat_1_v5_gn_1_110320 Secondary Identifier:  ? PAC:38946579
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_110320 0.5kb upstream 0.5kb upstream 14752   true Lsat_1_v8_lg_1: 157632465-157647216 Lactuca sativa
Lsat_1_v5_gn_1_110320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 157632465-157632964 Lactuca sativa
Lsat_1_v5_gn_1_110320 0.5kb downstream 0.5kb downstream 14752   true Lsat_1_v8_lg_1: 157632965-157647716 Lactuca sativa
Lsat_1_v5_gn_1_110320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 157647217-157647716 Lactuca sativa
Lsat_1_v5_gn_1_110320 1.0kb upstream 1.0kb upstream 15252   true Lsat_1_v8_lg_1: 157631965-157647216 Lactuca sativa
Lsat_1_v5_gn_1_110320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 157631965-157632964 Lactuca sativa
Lsat_1_v5_gn_1_110320 1.0kb downstream 1.0kb downstream 15252   true Lsat_1_v8_lg_1: 157632965-157648216 Lactuca sativa
Lsat_1_v5_gn_1_110320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 157647217-157648216 Lactuca sativa
Lsat_1_v5_gn_1_110320 2.0kb upstream 2.0kb upstream 16252   true Lsat_1_v8_lg_1: 157630965-157647216 Lactuca sativa
Lsat_1_v5_gn_1_110320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 157630965-157632964 Lactuca sativa
Lsat_1_v5_gn_1_110320 2.0kb downstream 2.0kb downstream 16252   true Lsat_1_v8_lg_1: 157632965-157649216 Lactuca sativa
Lsat_1_v5_gn_1_110320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 157647217-157649216 Lactuca sativa
Lsat_1_v5_gn_1_110320 5.0kb upstream 5.0kb upstream 19252   true Lsat_1_v8_lg_1: 157627965-157647216 Lactuca sativa
Lsat_1_v5_gn_1_110320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 157627965-157632964 Lactuca sativa
Lsat_1_v5_gn_1_110320 5.0kb downstream 5.0kb downstream 19252   true Lsat_1_v8_lg_1: 157632965-157652216 Lactuca sativa
Lsat_1_v5_gn_1_110320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 157647217-157652216 Lactuca sativa
Lsat_1_v5_gn_1_110320 10.0kb upstream 10.0kb upstream 24252   true Lsat_1_v8_lg_1: 157622965-157647216 Lactuca sativa
Lsat_1_v5_gn_1_110320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 157622965-157632964 Lactuca sativa
Lsat_1_v5_gn_1_110320 10.0kb downstream 10.0kb downstream 24252   true Lsat_1_v8_lg_1: 157632965-157657216 Lactuca sativa
Lsat_1_v5_gn_1_110320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 157647217-157657216 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470128 5263 Asterids View MSA
123739078 5271 Pentapetalae View MSA
122787261 5272 Eudicot View MSA
122046503 5273 Angiosperm View MSA
121349433 5274 Embryophyte View MSA
123381307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain