Gene : Lsat_1_v5_gn_1_112021 L. sativa V8
Defline:  (1 of 2) PTHR15629//PTHR15629:SF9 - SH3YL1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3471
Name:  ? Lsat_1_v5_gn_1_112021 Secondary Identifier:  ? PAC:38947336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_112021 0.5kb upstream 0.5kb upstream 4076   true Lsat_1_v8_lg_1: 166792291-166796366 Lactuca sativa
Lsat_1_v5_gn_1_112021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 166795867-166796366 Lactuca sativa
Lsat_1_v5_gn_1_112021 0.5kb downstream 0.5kb downstream 4076   true Lsat_1_v8_lg_1: 166791791-166795866 Lactuca sativa
Lsat_1_v5_gn_1_112021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 166791791-166792290 Lactuca sativa
Lsat_1_v5_gn_1_112021 1.0kb upstream 1.0kb upstream 4576   true Lsat_1_v8_lg_1: 166792291-166796866 Lactuca sativa
Lsat_1_v5_gn_1_112021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 166795867-166796866 Lactuca sativa
Lsat_1_v5_gn_1_112021 1.0kb downstream 1.0kb downstream 4576   true Lsat_1_v8_lg_1: 166791291-166795866 Lactuca sativa
Lsat_1_v5_gn_1_112021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 166791291-166792290 Lactuca sativa
Lsat_1_v5_gn_1_112021 2.0kb upstream 2.0kb upstream 5576   true Lsat_1_v8_lg_1: 166792291-166797866 Lactuca sativa
Lsat_1_v5_gn_1_112021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 166795867-166797866 Lactuca sativa
Lsat_1_v5_gn_1_112021 2.0kb downstream 2.0kb downstream 5576   true Lsat_1_v8_lg_1: 166790291-166795866 Lactuca sativa
Lsat_1_v5_gn_1_112021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 166790291-166792290 Lactuca sativa
Lsat_1_v5_gn_1_112021 5.0kb upstream 5.0kb upstream 8576   true Lsat_1_v8_lg_1: 166792291-166800866 Lactuca sativa
Lsat_1_v5_gn_1_112021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 166795867-166800866 Lactuca sativa
Lsat_1_v5_gn_1_112021 5.0kb downstream 5.0kb downstream 8576   true Lsat_1_v8_lg_1: 166787291-166795866 Lactuca sativa
Lsat_1_v5_gn_1_112021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 166787291-166792290 Lactuca sativa
Lsat_1_v5_gn_1_112021 10.0kb upstream 10.0kb upstream 13576   true Lsat_1_v8_lg_1: 166792291-166805866 Lactuca sativa
Lsat_1_v5_gn_1_112021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 166795867-166805866 Lactuca sativa
Lsat_1_v5_gn_1_112021 10.0kb downstream 10.0kb downstream 13576   true Lsat_1_v8_lg_1: 166782291-166795866 Lactuca sativa
Lsat_1_v5_gn_1_112021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 166782291-166792290 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480622 5263 Asterids View MSA
123736905 5271 Pentapetalae View MSA
122785686 5272 Eudicot View MSA
122047876 5273 Angiosperm View MSA
121349418 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain