Gene : Lsat_1_v5_gn_1_112921 L. sativa V8
Defline:  (1 of 1) 1.13.11.53//1.13.11.54 - Acireductone dioxygenase (Ni(2+)-requiring) / E-2 // Acireductone dioxygenase (Fe(2+)-requiring) / E-2' Genomic Order:  3501
Name:  ? Lsat_1_v5_gn_1_112921 Secondary Identifier:  ? PAC:38945645
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-4361 Lactuca sativa pathologic  
Lsativa PWY-5389 Lactuca sativa pathologic  
Lsativa PWY-7270 Lactuca sativa pathologic  
Lsativa PWY-7528 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_112921 0.5kb upstream 0.5kb upstream 3187   true Lsat_1_v8_lg_1: 169360039-169363225 Lactuca sativa
Lsat_1_v5_gn_1_112921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 169360039-169360538 Lactuca sativa
Lsat_1_v5_gn_1_112921 0.5kb downstream 0.5kb downstream 3187   true Lsat_1_v8_lg_1: 169360539-169363725 Lactuca sativa
Lsat_1_v5_gn_1_112921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 169363226-169363725 Lactuca sativa
Lsat_1_v5_gn_1_112921 1.0kb upstream 1.0kb upstream 3687   true Lsat_1_v8_lg_1: 169359539-169363225 Lactuca sativa
Lsat_1_v5_gn_1_112921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 169359539-169360538 Lactuca sativa
Lsat_1_v5_gn_1_112921 1.0kb downstream 1.0kb downstream 3687   true Lsat_1_v8_lg_1: 169360539-169364225 Lactuca sativa
Lsat_1_v5_gn_1_112921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 169363226-169364225 Lactuca sativa
Lsat_1_v5_gn_1_112921 2.0kb upstream 2.0kb upstream 4687   true Lsat_1_v8_lg_1: 169358539-169363225 Lactuca sativa
Lsat_1_v5_gn_1_112921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 169358539-169360538 Lactuca sativa
Lsat_1_v5_gn_1_112921 2.0kb downstream 2.0kb downstream 4687   true Lsat_1_v8_lg_1: 169360539-169365225 Lactuca sativa
Lsat_1_v5_gn_1_112921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 169363226-169365225 Lactuca sativa
Lsat_1_v5_gn_1_112921 5.0kb upstream 5.0kb upstream 7687   true Lsat_1_v8_lg_1: 169355539-169363225 Lactuca sativa
Lsat_1_v5_gn_1_112921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 169355539-169360538 Lactuca sativa
Lsat_1_v5_gn_1_112921 5.0kb downstream 5.0kb downstream 7687   true Lsat_1_v8_lg_1: 169360539-169368225 Lactuca sativa
Lsat_1_v5_gn_1_112921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 169363226-169368225 Lactuca sativa
Lsat_1_v5_gn_1_112921 10.0kb upstream 10.0kb upstream 12687   true Lsat_1_v8_lg_1: 169350539-169363225 Lactuca sativa
Lsat_1_v5_gn_1_112921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 169350539-169360538 Lactuca sativa
Lsat_1_v5_gn_1_112921 10.0kb downstream 10.0kb downstream 12687   true Lsat_1_v8_lg_1: 169360539-169373225 Lactuca sativa
Lsat_1_v5_gn_1_112921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 169363226-169373225 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479636 5263 Asterids View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain