Gene : Lsat_1_v5_gn_1_113921 L. sativa V8
Defline:  (1 of 1) PTHR10315//PTHR10315:SF29 - SEVEN IN ABSENTIA HOMOLOG // SUBFAMILY NOT NAMED Genomic Order:  3508
Name:  ? Lsat_1_v5_gn_1_113921 Secondary Identifier:  ? PAC:38946397
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7511 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_113921 0.5kb upstream 0.5kb upstream 4485   true Lsat_1_v8_lg_1: 169791179-169795663 Lactuca sativa
Lsat_1_v5_gn_1_113921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 169791179-169791678 Lactuca sativa
Lsat_1_v5_gn_1_113921 0.5kb downstream 0.5kb downstream 4485   true Lsat_1_v8_lg_1: 169791679-169796163 Lactuca sativa
Lsat_1_v5_gn_1_113921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 169795664-169796163 Lactuca sativa
Lsat_1_v5_gn_1_113921 1.0kb upstream 1.0kb upstream 4985   true Lsat_1_v8_lg_1: 169790679-169795663 Lactuca sativa
Lsat_1_v5_gn_1_113921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 169790679-169791678 Lactuca sativa
Lsat_1_v5_gn_1_113921 1.0kb downstream 1.0kb downstream 4985   true Lsat_1_v8_lg_1: 169791679-169796663 Lactuca sativa
Lsat_1_v5_gn_1_113921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 169795664-169796663 Lactuca sativa
Lsat_1_v5_gn_1_113921 2.0kb upstream 2.0kb upstream 5985   true Lsat_1_v8_lg_1: 169789679-169795663 Lactuca sativa
Lsat_1_v5_gn_1_113921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 169789679-169791678 Lactuca sativa
Lsat_1_v5_gn_1_113921 2.0kb downstream 2.0kb downstream 5985   true Lsat_1_v8_lg_1: 169791679-169797663 Lactuca sativa
Lsat_1_v5_gn_1_113921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 169795664-169797663 Lactuca sativa
Lsat_1_v5_gn_1_113921 5.0kb upstream 5.0kb upstream 8985   true Lsat_1_v8_lg_1: 169786679-169795663 Lactuca sativa
Lsat_1_v5_gn_1_113921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 169786679-169791678 Lactuca sativa
Lsat_1_v5_gn_1_113921 5.0kb downstream 5.0kb downstream 8985   true Lsat_1_v8_lg_1: 169791679-169800663 Lactuca sativa
Lsat_1_v5_gn_1_113921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 169795664-169800663 Lactuca sativa
Lsat_1_v5_gn_1_113921 10.0kb upstream 10.0kb upstream 13985   true Lsat_1_v8_lg_1: 169781679-169795663 Lactuca sativa
Lsat_1_v5_gn_1_113921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 169781679-169791678 Lactuca sativa
Lsat_1_v5_gn_1_113921 10.0kb downstream 10.0kb downstream 13985   true Lsat_1_v8_lg_1: 169791679-169805663 Lactuca sativa
Lsat_1_v5_gn_1_113921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 169795664-169805663 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470496 5263 Asterids View MSA
123750736 5271 Pentapetalae View MSA
122797657 5272 Eudicot View MSA
122049350 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain