Gene : Lsat_1_v5_gn_1_115021 L. sativa V8
Defline:  (1 of 1) K15542 - polyadenylation factor subunit 2 (PFS2) Genomic Order:  3555
Name:  ? Lsat_1_v5_gn_1_115021 Secondary Identifier:  ? PAC:38942199
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_115021 0.5kb upstream 0.5kb upstream 10010   true Lsat_1_v8_lg_1: 172598547-172608556 Lactuca sativa
Lsat_1_v5_gn_1_115021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 172598547-172599046 Lactuca sativa
Lsat_1_v5_gn_1_115021 0.5kb downstream 0.5kb downstream 10010   true Lsat_1_v8_lg_1: 172599047-172609056 Lactuca sativa
Lsat_1_v5_gn_1_115021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 172608557-172609056 Lactuca sativa
Lsat_1_v5_gn_1_115021 1.0kb upstream 1.0kb upstream 10510   true Lsat_1_v8_lg_1: 172598047-172608556 Lactuca sativa
Lsat_1_v5_gn_1_115021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 172598047-172599046 Lactuca sativa
Lsat_1_v5_gn_1_115021 1.0kb downstream 1.0kb downstream 10510   true Lsat_1_v8_lg_1: 172599047-172609556 Lactuca sativa
Lsat_1_v5_gn_1_115021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 172608557-172609556 Lactuca sativa
Lsat_1_v5_gn_1_115021 2.0kb upstream 2.0kb upstream 11510   true Lsat_1_v8_lg_1: 172597047-172608556 Lactuca sativa
Lsat_1_v5_gn_1_115021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 172597047-172599046 Lactuca sativa
Lsat_1_v5_gn_1_115021 2.0kb downstream 2.0kb downstream 11510   true Lsat_1_v8_lg_1: 172599047-172610556 Lactuca sativa
Lsat_1_v5_gn_1_115021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 172608557-172610556 Lactuca sativa
Lsat_1_v5_gn_1_115021 5.0kb upstream 5.0kb upstream 14510   true Lsat_1_v8_lg_1: 172594047-172608556 Lactuca sativa
Lsat_1_v5_gn_1_115021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 172594047-172599046 Lactuca sativa
Lsat_1_v5_gn_1_115021 5.0kb downstream 5.0kb downstream 14510   true Lsat_1_v8_lg_1: 172599047-172613556 Lactuca sativa
Lsat_1_v5_gn_1_115021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 172608557-172613556 Lactuca sativa
Lsat_1_v5_gn_1_115021 10.0kb upstream 10.0kb upstream 19510   true Lsat_1_v8_lg_1: 172589047-172608556 Lactuca sativa
Lsat_1_v5_gn_1_115021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 172589047-172599046 Lactuca sativa
Lsat_1_v5_gn_1_115021 10.0kb downstream 10.0kb downstream 19510   true Lsat_1_v8_lg_1: 172599047-172618556 Lactuca sativa
Lsat_1_v5_gn_1_115021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 172608557-172618556 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466892 5263 Asterids View MSA
123746547 5271 Pentapetalae View MSA
122787310 5272 Eudicot View MSA
122041977 5273 Angiosperm View MSA
123429083 5275 Viridiplantae View MSA
121345573 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain