Gene : Lsat_1_v5_gn_1_115540 L. sativa V8

Defline:  (1 of 5) PTHR31917:SF20 - AGENET DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3573
Name:  ? Lsat_1_v5_gn_1_115540 Secondary Identifier:  ? PAC:38945340

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_115540 0.5kb upstream 0.5kb upstream 5671   true Lsat_1_v8_lg_1: 175387037-175392707 Lactuca sativa
Lsat_1_v5_gn_1_115540 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 175392208-175392707 Lactuca sativa
Lsat_1_v5_gn_1_115540 0.5kb downstream 0.5kb downstream 5671   true Lsat_1_v8_lg_1: 175386537-175392207 Lactuca sativa
Lsat_1_v5_gn_1_115540 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 175386537-175387036 Lactuca sativa
Lsat_1_v5_gn_1_115540 1.0kb upstream 1.0kb upstream 6171   true Lsat_1_v8_lg_1: 175387037-175393207 Lactuca sativa
Lsat_1_v5_gn_1_115540 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 175392208-175393207 Lactuca sativa
Lsat_1_v5_gn_1_115540 1.0kb downstream 1.0kb downstream 6171   true Lsat_1_v8_lg_1: 175386037-175392207 Lactuca sativa
Lsat_1_v5_gn_1_115540 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 175386037-175387036 Lactuca sativa
Lsat_1_v5_gn_1_115540 2.0kb upstream 2.0kb upstream 7171   true Lsat_1_v8_lg_1: 175387037-175394207 Lactuca sativa
Lsat_1_v5_gn_1_115540 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 175392208-175394207 Lactuca sativa
Lsat_1_v5_gn_1_115540 2.0kb downstream 2.0kb downstream 7171   true Lsat_1_v8_lg_1: 175385037-175392207 Lactuca sativa
Lsat_1_v5_gn_1_115540 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 175385037-175387036 Lactuca sativa
Lsat_1_v5_gn_1_115540 5.0kb upstream 5.0kb upstream 10171   true Lsat_1_v8_lg_1: 175387037-175397207 Lactuca sativa
Lsat_1_v5_gn_1_115540 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 175392208-175397207 Lactuca sativa
Lsat_1_v5_gn_1_115540 5.0kb downstream 5.0kb downstream 10171   true Lsat_1_v8_lg_1: 175382037-175392207 Lactuca sativa
Lsat_1_v5_gn_1_115540 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 175382037-175387036 Lactuca sativa
Lsat_1_v5_gn_1_115540 10.0kb upstream 10.0kb upstream 15171   true Lsat_1_v8_lg_1: 175387037-175402207 Lactuca sativa
Lsat_1_v5_gn_1_115540 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 175392208-175402207 Lactuca sativa
Lsat_1_v5_gn_1_115540 10.0kb downstream 10.0kb downstream 15171   true Lsat_1_v8_lg_1: 175377037-175392207 Lactuca sativa
Lsat_1_v5_gn_1_115540 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 175377037-175387036 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480011 5263 Asterids View MSA
123746152 5271 Pentapetalae View MSA
122796207 5272 Eudicot View MSA
122050823 5273 Angiosperm View MSA
121349360 5274 Embryophyte View MSA
123381286 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain