Gene : Lsat_1_v5_gn_1_17900 L. sativa V8
Defline:  (1 of 1) PF13320 - Domain of unknown function (DUF4091) (DUF4091) Genomic Order:  618
Name:  ? Lsat_1_v5_gn_1_17900 Secondary Identifier:  ? PAC:38942906
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_17900 0.5kb upstream 0.5kb upstream 4665   true Lsat_1_v8_lg_1: 21457971-21462635 Lactuca sativa
Lsat_1_v5_gn_1_17900 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 21457971-21458470 Lactuca sativa
Lsat_1_v5_gn_1_17900 0.5kb downstream 0.5kb downstream 4665   true Lsat_1_v8_lg_1: 21458471-21463135 Lactuca sativa
Lsat_1_v5_gn_1_17900 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 21462636-21463135 Lactuca sativa
Lsat_1_v5_gn_1_17900 1.0kb upstream 1.0kb upstream 5165   true Lsat_1_v8_lg_1: 21457471-21462635 Lactuca sativa
Lsat_1_v5_gn_1_17900 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 21457471-21458470 Lactuca sativa
Lsat_1_v5_gn_1_17900 1.0kb downstream 1.0kb downstream 5165   true Lsat_1_v8_lg_1: 21458471-21463635 Lactuca sativa
Lsat_1_v5_gn_1_17900 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 21462636-21463635 Lactuca sativa
Lsat_1_v5_gn_1_17900 2.0kb upstream 2.0kb upstream 6165   true Lsat_1_v8_lg_1: 21456471-21462635 Lactuca sativa
Lsat_1_v5_gn_1_17900 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 21456471-21458470 Lactuca sativa
Lsat_1_v5_gn_1_17900 2.0kb downstream 2.0kb downstream 6165   true Lsat_1_v8_lg_1: 21458471-21464635 Lactuca sativa
Lsat_1_v5_gn_1_17900 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 21462636-21464635 Lactuca sativa
Lsat_1_v5_gn_1_17900 5.0kb upstream 5.0kb upstream 9165   true Lsat_1_v8_lg_1: 21453471-21462635 Lactuca sativa
Lsat_1_v5_gn_1_17900 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 21453471-21458470 Lactuca sativa
Lsat_1_v5_gn_1_17900 5.0kb downstream 5.0kb downstream 9165   true Lsat_1_v8_lg_1: 21458471-21467635 Lactuca sativa
Lsat_1_v5_gn_1_17900 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 21462636-21467635 Lactuca sativa
Lsat_1_v5_gn_1_17900 10.0kb upstream 10.0kb upstream 14165   true Lsat_1_v8_lg_1: 21448471-21462635 Lactuca sativa
Lsat_1_v5_gn_1_17900 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 21448471-21458470 Lactuca sativa
Lsat_1_v5_gn_1_17900 10.0kb downstream 10.0kb downstream 14165   true Lsat_1_v8_lg_1: 21458471-21472635 Lactuca sativa
Lsat_1_v5_gn_1_17900 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 21462636-21472635 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473636 5263 Asterids View MSA
123748804 5271 Pentapetalae View MSA
122791927 5272 Eudicot View MSA
122047964 5273 Angiosperm View MSA
121347370 5274 Embryophyte View MSA
123380536 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain