Gene : Lsat_1_v5_gn_1_18521 L. sativa V8
Defline:  (1 of 4) PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Genomic Order:  639
Name:  ? Lsat_1_v5_gn_1_18521 Secondary Identifier:  ? PAC:38947762
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_18521 0.5kb upstream 0.5kb upstream 2055   true Lsat_1_v8_lg_1: 22066095-22068149 Lactuca sativa
Lsat_1_v5_gn_1_18521 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 22066095-22066594 Lactuca sativa
Lsat_1_v5_gn_1_18521 0.5kb downstream 0.5kb downstream 2055   true Lsat_1_v8_lg_1: 22066595-22068649 Lactuca sativa
Lsat_1_v5_gn_1_18521 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 22068150-22068649 Lactuca sativa
Lsat_1_v5_gn_1_18521 1.0kb upstream 1.0kb upstream 2555   true Lsat_1_v8_lg_1: 22065595-22068149 Lactuca sativa
Lsat_1_v5_gn_1_18521 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 22065595-22066594 Lactuca sativa
Lsat_1_v5_gn_1_18521 1.0kb downstream 1.0kb downstream 2555   true Lsat_1_v8_lg_1: 22066595-22069149 Lactuca sativa
Lsat_1_v5_gn_1_18521 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 22068150-22069149 Lactuca sativa
Lsat_1_v5_gn_1_18521 2.0kb upstream 2.0kb upstream 3555   true Lsat_1_v8_lg_1: 22064595-22068149 Lactuca sativa
Lsat_1_v5_gn_1_18521 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 22064595-22066594 Lactuca sativa
Lsat_1_v5_gn_1_18521 2.0kb downstream 2.0kb downstream 3555   true Lsat_1_v8_lg_1: 22066595-22070149 Lactuca sativa
Lsat_1_v5_gn_1_18521 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 22068150-22070149 Lactuca sativa
Lsat_1_v5_gn_1_18521 5.0kb upstream 5.0kb upstream 6555   true Lsat_1_v8_lg_1: 22061595-22068149 Lactuca sativa
Lsat_1_v5_gn_1_18521 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 22061595-22066594 Lactuca sativa
Lsat_1_v5_gn_1_18521 5.0kb downstream 5.0kb downstream 6555   true Lsat_1_v8_lg_1: 22066595-22073149 Lactuca sativa
Lsat_1_v5_gn_1_18521 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 22068150-22073149 Lactuca sativa
Lsat_1_v5_gn_1_18521 10.0kb upstream 10.0kb upstream 11555   true Lsat_1_v8_lg_1: 22056595-22068149 Lactuca sativa
Lsat_1_v5_gn_1_18521 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 22056595-22066594 Lactuca sativa
Lsat_1_v5_gn_1_18521 10.0kb downstream 10.0kb downstream 11555   true Lsat_1_v8_lg_1: 22066595-22078149 Lactuca sativa
Lsat_1_v5_gn_1_18521 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 22068150-22078149 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470837 5263 Asterids View MSA
123750017 5271 Pentapetalae View MSA
122793132 5272 Eudicot View MSA
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain