Gene : Lsat_1_v5_gn_1_19180 L. sativa V8
Defline:  (1 of 1) PTHR12869//PTHR12869:SF0 - SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN // TRANSMEMBRANE PROTEIN 147 Genomic Order:  657
Name:  ? Lsat_1_v5_gn_1_19180 Secondary Identifier:  ? PAC:38944605
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_19180 0.5kb upstream 0.5kb upstream 2803   true Lsat_1_v8_lg_1: 22638816-22641618 Lactuca sativa
Lsat_1_v5_gn_1_19180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 22638816-22639315 Lactuca sativa
Lsat_1_v5_gn_1_19180 0.5kb downstream 0.5kb downstream 2803   true Lsat_1_v8_lg_1: 22639316-22642118 Lactuca sativa
Lsat_1_v5_gn_1_19180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 22641619-22642118 Lactuca sativa
Lsat_1_v5_gn_1_19180 1.0kb upstream 1.0kb upstream 3303   true Lsat_1_v8_lg_1: 22638316-22641618 Lactuca sativa
Lsat_1_v5_gn_1_19180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 22638316-22639315 Lactuca sativa
Lsat_1_v5_gn_1_19180 1.0kb downstream 1.0kb downstream 3303   true Lsat_1_v8_lg_1: 22639316-22642618 Lactuca sativa
Lsat_1_v5_gn_1_19180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 22641619-22642618 Lactuca sativa
Lsat_1_v5_gn_1_19180 2.0kb upstream 2.0kb upstream 4303   true Lsat_1_v8_lg_1: 22637316-22641618 Lactuca sativa
Lsat_1_v5_gn_1_19180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 22637316-22639315 Lactuca sativa
Lsat_1_v5_gn_1_19180 2.0kb downstream 2.0kb downstream 4303   true Lsat_1_v8_lg_1: 22639316-22643618 Lactuca sativa
Lsat_1_v5_gn_1_19180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 22641619-22643618 Lactuca sativa
Lsat_1_v5_gn_1_19180 5.0kb upstream 5.0kb upstream 7303   true Lsat_1_v8_lg_1: 22634316-22641618 Lactuca sativa
Lsat_1_v5_gn_1_19180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 22634316-22639315 Lactuca sativa
Lsat_1_v5_gn_1_19180 5.0kb downstream 5.0kb downstream 7303   true Lsat_1_v8_lg_1: 22639316-22646618 Lactuca sativa
Lsat_1_v5_gn_1_19180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 22641619-22646618 Lactuca sativa
Lsat_1_v5_gn_1_19180 10.0kb upstream 10.0kb upstream 12303   true Lsat_1_v8_lg_1: 22629316-22641618 Lactuca sativa
Lsat_1_v5_gn_1_19180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 22629316-22639315 Lactuca sativa
Lsat_1_v5_gn_1_19180 10.0kb downstream 10.0kb downstream 12303   true Lsat_1_v8_lg_1: 22639316-22651618 Lactuca sativa
Lsat_1_v5_gn_1_19180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 22641619-22651618 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467989 5263 Asterids View MSA
123746245 5271 Pentapetalae View MSA
122789833 5272 Eudicot View MSA
122046816 5273 Angiosperm View MSA
121343820 5274 Embryophyte View MSA
123379923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain