Gene : Lsat_1_v5_gn_1_19460 L. sativa V8
Defline:  (1 of 1) PF04129//PF09763//PF15277 - Vps52 / Sac2 family (Vps52) // Exocyst complex component Sec3 (Sec3_C) // Exocyst complex component SEC3 N-terminal PIP2 binding PH (Sec3-PIP2_bind) Genomic Order:  645
Name:  ? Lsat_1_v5_gn_1_19460 Secondary Identifier:  ? PAC:38943548
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_19460 0.5kb upstream 0.5kb upstream 7957   true Lsat_1_v8_lg_1: 22325938-22333894 Lactuca sativa
Lsat_1_v5_gn_1_19460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 22325938-22326437 Lactuca sativa
Lsat_1_v5_gn_1_19460 0.5kb downstream 0.5kb downstream 7957   true Lsat_1_v8_lg_1: 22326438-22334394 Lactuca sativa
Lsat_1_v5_gn_1_19460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 22333895-22334394 Lactuca sativa
Lsat_1_v5_gn_1_19460 1.0kb upstream 1.0kb upstream 8457   true Lsat_1_v8_lg_1: 22325438-22333894 Lactuca sativa
Lsat_1_v5_gn_1_19460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 22325438-22326437 Lactuca sativa
Lsat_1_v5_gn_1_19460 1.0kb downstream 1.0kb downstream 8457   true Lsat_1_v8_lg_1: 22326438-22334894 Lactuca sativa
Lsat_1_v5_gn_1_19460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 22333895-22334894 Lactuca sativa
Lsat_1_v5_gn_1_19460 2.0kb upstream 2.0kb upstream 9457   true Lsat_1_v8_lg_1: 22324438-22333894 Lactuca sativa
Lsat_1_v5_gn_1_19460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 22324438-22326437 Lactuca sativa
Lsat_1_v5_gn_1_19460 2.0kb downstream 2.0kb downstream 9457   true Lsat_1_v8_lg_1: 22326438-22335894 Lactuca sativa
Lsat_1_v5_gn_1_19460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 22333895-22335894 Lactuca sativa
Lsat_1_v5_gn_1_19460 5.0kb upstream 5.0kb upstream 12457   true Lsat_1_v8_lg_1: 22321438-22333894 Lactuca sativa
Lsat_1_v5_gn_1_19460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 22321438-22326437 Lactuca sativa
Lsat_1_v5_gn_1_19460 5.0kb downstream 5.0kb downstream 12457   true Lsat_1_v8_lg_1: 22326438-22338894 Lactuca sativa
Lsat_1_v5_gn_1_19460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 22333895-22338894 Lactuca sativa
Lsat_1_v5_gn_1_19460 10.0kb upstream 10.0kb upstream 17457   true Lsat_1_v8_lg_1: 22316438-22333894 Lactuca sativa
Lsat_1_v5_gn_1_19460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 22316438-22326437 Lactuca sativa
Lsat_1_v5_gn_1_19460 10.0kb downstream 10.0kb downstream 17457   true Lsat_1_v8_lg_1: 22326438-22343894 Lactuca sativa
Lsat_1_v5_gn_1_19460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 22333895-22343894 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468285 5263 Asterids View MSA
123744034 5271 Pentapetalae View MSA
122788203 5272 Eudicot View MSA
122043094 5273 Angiosperm View MSA
121346884 5274 Embryophyte View MSA
123428518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain